Carica papaya (papaya): 110807029
Help
Entry
110807029 CDS
T05151
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
cpap03015
mRNA surveillance pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110807029
09122 Translation
03013 Nucleocytoplasmic transport
110807029
03015 mRNA surveillance pathway
110807029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110807029
03041 Spliceosome [BR:
cpap03041
]
110807029
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110807029
TREX complex
110807029
Spliceosome [BR:
cpap03041
]
Complex C
Other components
EJC/TREX
110807029
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110807029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Cauli_VI
Motif
Other DBs
NCBI-GeneID:
110807029
NCBI-ProteinID:
XP_021887739
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MANRLDMSLDDIINSSKKSDGSNMRGRGSRGSVTGPSHRFSNRAAYRTAPYPVQAPYAGW
QYDTFMEDAGGFMARVGGPSSIESGTKLYISNLDYGVSNEDIKELFSEIGDLKRYAIHYD
RSGRSKGTAEVVFSRWSEALAAVKRYDNVQLDGKPMKIDIVGPNIMAHSVLPSATNGMYV
NRYGAARRGRGRGNGMGQPRVSGRGTRRGRQVRGYGEKISAEDLDADLDKYHKEAMETN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcttggacatgtccctcgacgatatcatcaactcaagtaagaagtccgac
ggttccaatatgcggggtaggggttctcgcggctcggttacaggcccttctcatcgcttc
tctaaccgcgccgcttatcgaacggctccgtatccggttcaagcgccctatgctggttgg
cagtacgacacgttcatggaagatgcggggggtttcatggcacgagtaggtgggccttcc
tcgatagagagcgggactaagctttatatttccaatttggattatggggtttcgaatgaa
gacatcaaggagctcttttcagagattggtgacctaaagcggtatgcaattcattatgat
cggagtggaaggtcaaagggaacagctgaagttgtcttctcaaggtggagtgaagctctg
gctgctgtcaagagatatgataatgttcaactagatggaaagcctatgaaaatcgatatt
gtcggaccaaatatcatggcacactctgttctgccttcagctacaaatggaatgtatgta
aatcgatatggagctgctagaagaggtcgaggtagaggtaatggaatggggcagcctcgt
gttagtggccgtggaaccaggaggggtcgtcaggtcagaggttatggtgaaaaaatttct
gccgaagatcttgatgctgatttagataaatatcacaaagaagcaatggaaacaaactga
DBGET
integrated database retrieval system