Carica papaya (papaya): 110807135
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Entry
110807135 CDS
T05151
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpap03000
]
110807135
Transcription factors [BR:
cpap03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110807135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
PUMA_CC
CENP-F_leu_zip
KIF21A_4th
DUF948
GIT1_C
GemA
SBP_bac_4HB
DMPK_coil
CHIP_TPR_N
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
110807135
NCBI-ProteinID:
XP_021887859
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MSSRRSRSRQSSSSRISDDQITELITKLQQLIPELRHRRSDKLSASKVLQETCNYIRNLH
REVDDLSDRLSALLASTDSDSPEAAIIRSLLM
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcagaagatcacgttcaagacagtcaagtagttcgagaatcagtgacgaccag
atcacggagctcatcaccaaattgcaacaacttatccctgagctccgccatagacgctca
gacaagttatcagcttcaaaggtgttacaggagacttgtaactacatcaggaatctgcac
agagaagtggatgatttaagcgatcgcttgtctgctcttttggcttcaaccgacagtgat
agtcctgaggctgcaattattagaagtttacttatgtaa
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