Carica papaya (papaya): 110807155
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Entry
110807155 CDS
T05151
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110807155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110807155
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110807155
Prokaryotic type
Archaeal type
TFB
110807155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_8
DUF7573
Motif
Other DBs
NCBI-GeneID:
110807155
NCBI-ProteinID:
XP_021887882
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MADAFCSDCKKQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLRDISVATGVAEGTIRNSYKDLYPHVSKIIPAWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgttctgctcggactgcaagaagcagacggaggtggtgttcgaccactcg
gctggagatacggtgtgttcagagtgcgggctggtgctggagtcgcactccatcgatgag
acctccgagtggagaaccttcgccaacgagtcgggagacaatgaccccgttcgtgttggt
ggacctaccaatcccctccttgccgatggcggcctctccaccgtcatcgccaagcccaac
ggcgcatctggggacttcctctcctcctcccttggccgatggcagaaccgcggctccaac
cccgatcgggggctgatcctcgcttttaagacaatagccactatgtccgataggttaggc
cttgttgcaaccatcaaggaccgggctaacgagatatataaaaaggtggaagatcaaaag
tctagtagaggaagaaatcaggatgctctattggctgcctgcttgtatattgcatgtcgg
caggaggacaaaccacgcactgttaaggaaatttgttcggttgccaatggagccaccaag
aaggaaattggccgagcaaaagaatacatagtcaaacaactaggattggagactggtcag
tcagtcgagatgggaactatacatgctggagactttatgaggcgtttttgctccaatctt
ggcatgacaaatcaagcagttaaggctgcccaagaagctgttcagaaatctgaagagttc
gatataaggaggagtcccatatcaattgcagctgcagttatttatattataacccaactg
tcagatgataagaagcctctccgagacatctcagttgctacaggagtggccgaggggaca
atcagaaattcatacaaggatttatatcctcatgtgtcgaaaataataccggcctggtat
gcaaaagaagaggatcttaaaaatctctgcagcccttga
DBGET
integrated database retrieval system
