Carica papaya (papaya): 110807285
Help
Entry
110807285 CDS
T05151
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpap03000
]
110807285
Transcription factors [BR:
cpap03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
110807285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
XRCC4_CC
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
110807285
NCBI-ProteinID:
XP_021888059
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MDIAMGNSGTNNSSEEQRTSNRSDSEKRTHHRHNSSQIQHLELFFENCPHPDESQRRQLS
RELGLDPKQVKFWFQNKRTQTRAQSERADNSALREENERIQCENLAIREALKNAICPACG
GPPFGLEERQRSLQKLRMENAQLKEEHEKVSNFLAKYTGKPVSQFEEMSSPTRGKGPSNA
FDSLPPSYSTQIGFPSVDNLDNFIQKYQENIGNNLSVNNRVIDHRQYFDPWLISDVEKAF
MVETAASAMDELVRLLSVNEPLWIRSESSGSRAVIHRDTYEKIFPKVNGFKNMNSRIESS
KESGMIIMNGSHLIEMIMDPVKWTDLFPTIVCKAEKLYEVQAGASGNKNSCLLLMYEQMH
ILSPLVPAREFIILRNCRQLEAGLWVMVDVSYDLKDHTRPRCWKLPSGCMIQDMANGCSK
VIWIEHVEVDDKILTHQLYRDLLCSGSAYGAERWIVALQRICERLTFSKTENSCDSNHSS
VMSNGMKSMLKLCHRMIKDFCARLCMSCDNKLDFPHMHDVNSSGVRVCVHEGIGPSQPNG
TIVSATSSLWLPLPPLRVFNFFKDENMRNKWDILCEGNLVNVPFNPTENGMVMLQESFID
SLGGMVVYAPIDVPAMNVAITGDDINKSIPILPSGFVISTDGRQNNTGGASTSADTSLGM
RRGGGSLITVVFQVVVSTKDLNMESVATVKNLISSTIQRIKDVLNCSNIE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgcgatgggaaacagtggtactaacaactcaagtgaagaacaaagaacttca
aatcgtagtgattcagaaaaaaggacccaccatcgtcataatagtagccaaatacaacat
ctcgaattatttttcgagaactgtcctcacccagatgaaagccaaagacgtcaactcagt
agggaacttggactagaccctaaacaagtcaagttctggtttcaaaacaagaggactcaa
acaagggctcaaagtgagcgagcagacaactcggctctccgggaagaaaatgagcgaatt
caatgcgagaatctggcaattagagaggcattaaagaatgcaatttgtcctgcttgtggt
ggtcctccttttggtttagaagaacgtcaacgcagcctacaaaaacttcggatggaaaat
gcccaattgaaagaagagcatgagaaggtgagtaactttcttgcgaagtacacagggaaa
ccagtttcccagtttgaagaaatgagttcaccaaccagaggcaaaggaccgtccaatgct
tttgattccttgccaccaagttattcgactcaaattggattcccttctgtcgacaatctt
gataatttcatccaaaaatatcaagaaaatattggaaacaatttatcagtgaataatcgt
gttatcgatcatcgacaatacttcgatccttggctgatttcagatgtagagaaagctttc
atggtagaaactgctgcatctgccatggatgaactagttaggctcttgagcgtcaatgaa
ccattgtggattaggtcagaatcgagtggatcaagagcagttattcatcgtgatacatac
gagaagatcttccctaaggttaatgggtttaagaatatgaattctcgaatcgagtcatcg
aaagaatcggggatgataataatgaatggatctcacttgattgaaatgattatggatcca
gtgaaatggacggatcttttcccgacaattgtttgcaaggcagaaaaactttatgaagtt
caagctggagctagtggcaataaaaatagttgcttgttgctgatgtatgagcaaatgcac
attctgtctccgttggtgccggctcgtgaattcatcatccttcggaactgccggcaatta
gaagcaggcttatgggtgatggtggatgtatcttatgatttaaaagatcatactcgtcct
cgttgttggaagctaccttctggatgtatgattcaagatatggcaaatgggtgttcaaag
gttatttggatcgaacacgtagaagttgatgataaaattttaactcatcaattatataga
gatctactatgcagtggatctgcatatggagctgagcgatggatcgtcgcacttcaaaga
atatgtgagagattaactttctctaaaactgaaaattcttgtgattctaatcacagctca
gttatgtctaatggtatgaagagcatgttgaagctttgtcacaggatgataaaggacttc
tgcgcacgtttgtgcatgtcatgtgataacaaacttgatttccctcatatgcatgacgta
aatagtagtggagttcgagtttgtgttcatgagggaattggaccaagccaacctaatggt
acaattgttagtgctacctcctctctttggcttcctctccctcctctccgtgtctttaat
ttttttaaagacgagaatatgcgaaataagtgggatattttgtgcgaaggaaatttggtg
aacgtgcctttcaaccctactgagaatggcatggtaatgcttcaagagagtttcatcgac
agcttgggaggaatggtggtgtatgctccaattgatgtgccagccatgaatgtggcaata
accggtgatgacattaataagagcattcctattcttccctcaggctttgtgatttctacc
gacggtcgtcaaaataatacaggaggagcttcaaccagtgctgatactagcttaggtatg
aggagaggtggcggttctcttataacagtggtttttcaagtagtggtttctacaaaggac
ctgaacatggaatctgtagccactgtcaaaaatcttatcagctcaacgattcagaggatt
aaagatgttcttaattgctctaatattgagtag
DBGET
integrated database retrieval system
