Carica papaya (papaya): 110807378
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Entry
110807378 CDS
T05151
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110807378
03036 Chromosome and associated proteins [BR:
cpap03036
]
110807378
Spliceosome [BR:
cpap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110807378
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
110807378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT_Syf1_M
PIN_3
Motif
Other DBs
NCBI-GeneID:
110807378
NCBI-ProteinID:
XP_021888203
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MEDQNLTEESLAPISPQLRENIHNDDEQRTESSDSDDDSSESDDDELQISSQLQTLEDEL
SINPSNYDAHVQYIKILRKMSELEKLREAREAMSALFPLSPAMWQEWTKDEASLSTRPEA
LSAIEKLYERGLSDYLSVSLWCDYLNFVQEYDPSVRDCLPDGISKARNLFERAVTAAGLH
VTEGSKIWEAYREFEQAICPAIGEVDFEGREKQVQRIRNLFHRQLSVPLANLRSLLLGYK
AWEVEQGSKLDSESSNVDGIPSHIASAYQKALDMFHARIHLEEQISKKDISDTEKFQQFM
DYLIFEQSFGDPVRVQVLYERAVTEFPISSDLWLEYTRYLDRTLKAGKIVTDIYSRAIKN
CPWVGELWVRYLLSLERGHASEKEISAVFEKSLQCSFSTHEEYLDLFLTRVDGLRRRISS
ASEGNVTLDYSLIRGTFEQASDYLSPHMKNTDGLLCLHAYWARLELKFGKDLGAARGVWE
RLLKNCGSMLEAWQGYIAMEKELDHINEARSIYRRCYSKRFAGMGSEDICNAWLRFEREF
GTLEDYDHAVQKVTPRLEELRLFRLQQEPKAHNTSTHQQEQVLKRTSHEKRKPGPSMANE
LLPAKRQKNKGQNSKKMEVHNLAEVNNMDKTEEMEAKVEKQDNLNDQQMKASDSGKTKVY
MDQCTAFISNLSLKANYEDLRRFLQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaaaacctaactgaagaatcattagctccaatttctccacagttacgagag
aatatccacaacgatgacgaacaaagaaccgaatcttccgactccgacgacgattccagc
gagtcggacgacgacgaacttcaaatcagcagtcaactgcaaactctggaggatgaactc
tctatcaatccttccaactacgacgctcatgtccaatatataaagattctaaggaaaatg
agtgagctcgagaagctaagagaagctagggaagctatgagcgcattatttccacttagc
cctgctatgtggcaggaatggactaaggatgaagcttctctctccactcggcctgaggct
ttatctgctattgagaagctttatgagcgagggctttccgattatctgtctgtgtctttg
tggtgtgactacctcaattttgtgcaagaatatgatccctcagtgcgcgactgcttacct
gacggtatttcgaaagcaagaaatttgtttgagcgtgctgtcactgcagctggtttgcat
gtcactgaaggtagtaaaatatgggaagcatacagggaatttgagcaagcaatttgtccc
gctattggtgaagttgacttcgagggaagagaaaagcaagtccaacgcattcgaaattta
tttcatcgccagttgtctgtgcctcttgctaatttgaggtcattacttcttgggtacaag
gcttgggaggtggaacaagggagtaagcttgattctgaatccagcaatgtggatggaatt
ccttctcatattgcttcagcatatcaaaaggccttagatatgtttcatgctcgtattcat
ctggaagaacagatcagcaagaaggatatatcagacactgagaaatttcagcaattcatg
gattacttgatattcgaacaatcatttggagatcctgtccgagttcaagttttgtatgaa
cgtgccgtaactgaatttcccatatcaagtgatctctggcttgagtatactcgttatctg
gatagaactttgaaggcaggaaaaattgtgacagatatttactctagagcaataaaaaat
tgtccgtgggttggagaactttgggttcgatatttgctttccctggaacgtgggcatgct
tctgagaaagagatatctgctgttttcgagaaatccttgcaatgctcgttttcaacccat
gaggagtatctagatttgttccttacccgtgtagatggcttgaggcgaagaatttcatct
gctagtgaaggaaacgtcacattggattattcattaataaggggaacttttgagcaagca
tcagactacttatcaccgcacatgaagaatacggatggtttgttgtgcttgcatgcttat
tgggcccgtctggagctaaaatttggaaaagatttaggtgcagctcgtggtgtttgggaa
agattgcttaagaattgtggttcgatgctagaagcttggcaaggttatattgcaatggag
aaggaattggatcatatcaatgaagctaggtccatttatcggagatgttacagtaaaaga
tttgctggaatgggttcagaggacatatgcaatgcttggctgcgctttgagagggaattc
ggtacattggaggattatgaccatgcagtacaaaaggttacaccgcgtctggaagagctg
cgattatttaggttgcaacaggaacctaaagcacataatacatcaacacatcagcaagaa
caagtcctcaaaagaacttctcatgaaaagagaaagccaggtccaagcatggctaatgaa
ctgttgccagccaagcggcagaaaaataaaggtcaaaactcgaagaaaatggaagtgcac
aacttagctgaagtaaataacatggacaagactgaagagatggaagccaaggttgagaaa
caagacaatttgaatgaccagcagatgaaagcctccgactctggcaaaactaaagtgtat
atggaccaatgcacagcttttatctcaaatcttagcctaaaggcaaactatgaagatctc
cgccggtttcttcaatga
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