Carica papaya (papaya): 110807424
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Entry
110807424 CDS
T05151
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110807424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110807424
03036 Chromosome and associated proteins [BR:
cpap03036
]
110807424
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110807424
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110807424
PBAF complex
110807424
GBAF(ncBAF) complex
110807424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110807424
NCBI-ProteinID:
XP_021888240
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MWEQARSPAPHEGFEVKRKGDQEFTVNIRLEMNYVPEKFKLSPALMEVLGIEVDTRPRII
AAIWHYVKARKLQNPNDPSFFSCDVALQKVFGEEKMKFTMVSQKISQHLTPPPPIHLEHK
IKLSGSSPAGTACYDVLVDVPFPIQRELSILLANAEKNKEIEACEEAICATIRKIHEHRR
RRAFFLGFSQSPVEFINALMESQSRDLKLVAGEGSRNAEKERRSDFFNQPWVEDAVIRYL
NRKPAPGNDVPGST
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagcaagctcgatcacctgcaccacacgagggtttcgaagtgaagagaaaaggg
gatcaagaatttacagtaaatatacggttggaaatgaattacgttcctgagaaatttaag
ctttcccctgcattgatggaagtgcttggtattgaggttgatacccgcccaagaattatt
gctgcaatctggcattacgtgaaggcaagaaaattgcagaacccaaatgacccttctttc
tttagctgcgatgtagctctccaaaaagtgtttggggaagaaaagatgaaatttacaatg
gtctcacagaaaatatctcagcatttgactcctccaccacctatacatttggagcataaa
atcaagctatcggggagtagtccagctggaactgcatgctacgatgtgttggttgatgtg
cccttcccaatacagagagaactgtctattctattagccaatgctgagaagaacaaagag
attgaggcctgtgaggaagcaatatgtgcaaccataagaaaaatacacgaacataggagg
agacgagcattttttctaggattcagtcaatcacctgtggaatttattaatgccttgatg
gaatctcaaagcagggatttgaagcttgtagctggagaaggtagtcgaaatgctgagaaa
gaacgtcggtcagatttcttcaatcaaccatgggttgaagatgctgttatccgatacttg
aatcgaaagccagcacccggaaatgatgttccagggagcacatga
DBGET
integrated database retrieval system
