Carica papaya (papaya): 110807569
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Entry
110807569 CDS
T05151
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110807569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110807569
Enzymes [BR:
cpap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
110807569
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110807569
DNA repair and recombination proteins [BR:
cpap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110807569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
TFIIF_alpha
DDHD
Motif
Other DBs
NCBI-GeneID:
110807569
NCBI-ProteinID:
XP_021888423
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MPELPEVEAARRAIEENCLGKKITRAIIANDSKVIDGVSASDFESSILGKTIVSANRKGK
NLWLHLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSTVKDSDEWPSKYSKFFIELDDGLEL
CFTDKRRFAKVRLLKDVLPTLVPPISDLGPDALLEPMAINQFSESLSKKKLSIKALLLDQ
GYISGIGNWIADEVLYQARIHPLQVAASLSKEQCAALHKCVKEVIEKALEVGADSSQFPS
NWIFHSREKKPGKAFVDGKRIDFISAGGRTTAYVPELQKLSGNQAKKAAVKPEKQTVKRK
GSKDDEEEESEDADDKAKLKQVAESRGRSKKPPVKRKSSESDESDDSNNDESDKNGDQKK
KSQKVTSSRKNKLAKTPKRKVTGPNNKNSQWKK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctaccggaggtggaggcggccaggagagcgatagaggagaattgcttgggg
aagaagataacgagagcgataatagcgaacgactccaaagtgattgatggcgtgtcagca
tctgatttcgagtcctcgattttgggaaagacaatcgtctctgccaaccgcaagggcaag
aacctctggctccaccttgattcccctccttttccgtcctttcagtttgggatggcagga
gctatatatattaagggggttgcagttactaagtataaaaggtctactgtcaaagattct
gatgaatggccttccaagtactcaaaattttttattgaactagatgatggtctggagcta
tgtttcactgacaagaggagatttgctaaagttcgcttgctcaaagatgtactacctact
ttagtacctccgatctctgatcttggccctgatgctttattggagcctatggcaattaat
caattttccgaatctctaagcaagaaaaaactttccattaaagctctattacttgatcag
ggttatatttcaggcattggaaactggattgctgatgaagtgctgtaccaagctagaatt
catcctctccaggttgctgccagcctgtccaaagaacaatgtgcagctttacacaagtgc
gtcaaggaggtcattgaaaaggcacttgaagttggggcagacagtagtcagtttcctagt
aattggatctttcattcccgtgaaaagaagcctggcaaggcttttgttgatggaaagaga
attgattttatcagtgccggtggcaggacaacagcttatgtaccagaattgcaaaagctg
agtggaaaccaagctaaaaaagctgcggttaaaccagaaaagcaaactgtaaaaagaaaa
ggaagtaaggatgatgaggaggaagaaagtgaggatgcagacgataaagccaaattgaaa
caagtcgcggaatcaagaggtcgtagcaagaaacctccagtgaaaagaaaatccagtgag
agtgacgaaagtgatgactctaacaatgatgagagcgataagaatggtgatcagaaaaag
aaatctcaaaaggtgacaagcagtagaaagaacaaattagcaaagacacccaagagaaaa
gtaactggtccaaataacaagaattcccagtggaaaaagtag
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