Carica papaya (papaya): 110807733
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Entry
110807733 CDS
T05151
Name
(RefSeq) putative uncharacterized protein DDB_G0274405 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110807733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110807733
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110807733
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110807733
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110807733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
110807733
NCBI-ProteinID:
XP_021888641
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MQPSSNSFLPFHQQKASQSTPSVGNSCPMLPNSMQVQPQMGIINPHLPIPFANSSNMPPL
MPQAGFMNAPAHPFHSQNNNLGTPQLTPVGAVSQPGFGVPILNNALMGQLCNPMQNPTQA
QGQLIHGLANLTQQLNQIMALATGQQFSMQNQVQNMNQFVPMQMPIPQGAPYGAPLGSQQ
LAGFGGSNFFGNPQFGVVNSKQTEQHLNKNWGRHGMNSPQSQGNSFGDLSSSTKTQQNQN
SQHSGITSSQGQPIKAGHINNLCSNRKNFQGKTFPRNLKSHISQKGFQKSQFHQSGNGKR
KFGSSNDHKGKGPCNERPTKLRLCDSANVAKEMKRCLALPYTGKEIQQWREERKKNYPSK
ANIQKKLNKKLADSGDSEAKIRREQLKEILSKQAELGVEVAEVPSHYFSDSEKQGGRGNK
NGRALTKRKESKNKQDIRGRNNKNDKSAKQERLRNPSNNSCLNKREPTLLQKLLSADVKR
ERCHLLQVFRFVVMNSFFKDGPDKLLKFPKVVVKESGCEEKSTCTIGEDVSDSSKKIVLE
NVVDSEDVGVHDKDASNDEGSARVEQAAGQFVKREELIDEEIGRPGGETEEGEIID
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcttccaattcttttcttccctttcatcaacagaaagcttcccagtctact
ccttcagtagggaattcatgccctatgttaccgaattccatgcaagttcagcctcaaatg
ggtatcatcaatccgcaccttcctattccgtttgccaatagcagcaatatgccgccattg
atgccccaagctggtttcatgaatgctcctgcccatccctttcactctcaaaataacaat
ctgggtacgccccaactcactcctgtgggtgctgtttctcagcctggtttcggtgtaccc
atcttgaataacgctttaatgggtcagttgtgcaatccaatgcagaatccaactcaagca
cagggacaattaattcatgggctggcgaatctgactcaacagctaaatcagattatggct
ttggcaactggtcaacaattctctatgcaaaaccaagtgcagaatatgaaccaatttgtg
ccaatgcaaatgccaattcctcaaggagccccttatggtgccccattgggttctcagcag
ttggcaggctttggtggttccaatttttttgggaatccacagtttggtgttgtgaattcg
aagcaaactgagcagcatcttaacaaaaactggggtaggcacggtatgaattctccacaa
tcacaagggaactccttcggtgatctatcttcttcaactaagacgcagcagaatcagaat
tctcaacattctggtatcacgagttcgcagggccaaccaatcaaagctggtcatattaat
aacttatgttcaaataggaaaaattttcaaggcaaaacgttccctagaaacctgaaaagt
catatatcacaaaaaggattccaaaagtctcagtttcatcaatcgggaaatggaaagaga
aagtttgggtcctctaatgatcataaaggaaaagggccttgcaatgagaggcctactaaa
ctccgcctatgtgattctgcaaatgtagctaaggaaatgaaaagatgtcttgctttgcca
tatacggggaaggaaattcagcagtggcgtgaagaacgtaagaagaattatccatcgaaa
gccaatattcagaagaagctcaataagaaactagcagattctggtgatagcgaggccaaa
attcgaagagagcaactcaaggagatcttgtctaagcaggctgagttaggtgttgaagtt
gcagaggtaccgtcacattatttttcagattcagagaagcaagggggcagagggaacaag
aatggtagggcattaactaagaggaaagaatcaaaaaacaaacaagatataagggggaga
aataacaaaaatgacaagtctgccaagcaagaaagactaagaaatccatcgaacaattct
tgtttaaataagagagagcccacacttttgcagaagcttctgagtgcagacgtaaaaaga
gagagatgccacttgttgcaggtgtttaggttcgtggtgatgaactcgttcttcaaagat
ggccctgacaagcttcttaaatttcctaaagttgtagttaaagaaagtggttgtgaggag
aaatcaacgtgcaccatcggagaagacgtttctgacagcagcaagaagattgtacttgag
aatgtagtcgattctgaagatgtcggcgttcatgacaaagatgctagcaatgatgaaggt
agtgctcgagttgaacaagctgctggtcagtttgttaagagagaggagcttattgacgag
gaaataggtaggcccgggggagaaacagaagagggagaaatcattgattga
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