Carica papaya (papaya): 110808269
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Entry
110808269 CDS
T05151
Name
(RefSeq) RNA-binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110808269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110808269
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110808269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
PHM7_cyt
Ocnus
Motif
Other DBs
NCBI-GeneID:
110808269
NCBI-ProteinID:
XP_021889401
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MESEQGKLFVGGISRETSEDILKEHFSRYGIVLGSVVAKDRCTKNPRGFGFVWFSDSSSA
DKALQDTHVILGRTVEVKKAIPRGEQHQNHQQQLQKNQPREQQNFGEIEINGNGNIDNQF
RTKKIFVGGLSASLTEEEFKNYFERFGRITDVVVMHDSMTNRPRGFGFVTFDSEESVENV
MQKNFHELNSRFVEVKRAVPKEGIHATNSNSNTQFGVGTGPSYNSSQFCEYPPNSPAYGM
LPGYGPPSGYTGIGGFLYGMGVYGCGYPMVGYDGVGYVVPPLAPRSPWYPPVMPGTRICS
LPYGNAPVYPAYMNGGVDPMGMVGGGYNAIGGPGLDLKLDQVVGGNGHLPVDSISTQFEG
LKLDIDSLGLNKTGGGASSKQKRRGLDGKPKTLHVDVSR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggagcaaggcaaattgttcgtaggagggatttctcgagagacgagcgaagat
atcctgaaggagcatttcagcagatacggtatcgtgttaggctcagttgtagctaaggac
aggtgtacgaagaatcctaggggttttggctttgtttggttttctgattcttcatcagct
gataaagctcttcaagacactcacgttatactaggaagaacggtagaagtgaaaaaagcc
atacccagaggtgaacaacatcaaaaccatcagcaacaactgcaaaaaaatcaacccaga
gaacaacagaattttggagagattgaaattaatggtaatggtaacatcgataatcagttt
agaactaaaaagatttttgtaggtggtttatcagctagtttaactgaggaagagttcaag
aattactttgagaggtttggtaggataactgatgtagttgtgatgcatgacagcatgaca
aaccggcctaggggctttggctttgttacctttgattcggaggaatctgttgagaatgtt
atgcagaagaattttcatgagttgaacagtaggtttgtggaggtaaagagggccgtacct
aaggagggaattcatgccactaacagtaattctaacacacagtttggagttggtacagga
ccttcctataacagttctcagttttgtgagtaccctcctaatagtcctgcatatgggatg
ctccctggttatggtcctccttccggatacactggtattggtggatttctttacggaatg
ggtgtttatggttgtggttaccctatggtcggatatgatggggttggttatgtggttcct
cctcttgctcctaggagcccttggtaccctcctgtgatgcctggaactaggatttgctct
ctgccttatggcaatgcgccagtttatcctgcttacatgaatggtggtgttgatcctatg
ggtatggtgggaggtggatacaatgcgataggagggcctggattggacttgaaattggat
caggttgttggtgggaatggacacttgccagttgactcgatatcaacccaatttgaaggt
ttaaaattggatattgattctttgggtttgaataaaactggtggtggtgcctctagcaaa
cagaaaaggagaggtcttgatggaaaacctaaaactttacatgtagatgtttctagataa
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