Carica papaya (papaya): 110808338
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Entry
110808338 CDS
T05151
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110808338
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110808338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
TEX13
Fiji_64_capsid
CREPT
Rx_N
G_path_suppress
Motif
Other DBs
NCBI-GeneID:
110808338
NCBI-ProteinID:
XP_021889500
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVATWDKQFHSSQMVQKVPL
LYLANDILQNSRRKGNEFVAEFWKVLPAALKDVAMKGDDHGKKVVSRLVNIWEERRVFGS
HAISLKDVMLGEDAVPPLEFSRKRSRSVRIMKRDSRSIRTKLTIGGAAEKIISAFHLVLS
EYPNEEAEMSKCKSAVNRIRKIEKNIDIAYTSAQEPKCKPLTKELEEEENLLKQCIEKLK
SVEASRLALISQLKEALHEQESELENIRTQMQVAEAQADEACNIRARLNNGDYLSKPSIK
TALPIDTNSKAGETPKRTAAAIAAEVADKLAASSSSQMIMHSVLSTFAAEEAKNAGLTKG
STVSKLTSSSDDSVMKSEKSLPIMDLNAFIPTSSLTAPPKHSYQSVMVPQPSMQNQAPSS
QGQYHILPNTPSQQYLQPSGGIMAPYVYGSIPPLPPGPPPPPPPHMMNPMMPLTQQPMQI
TPQHPIASAQQPPPLAYQQLAPLTQQPPAPPNFRPLQPPGMVYYGPPHLSQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtgttcagcgaacaaatactggcagacaaactctccaagctcaatagcact
caacagtgtattgaaacactctcacattggtgtatatttcatcgaagcaaagctgaactg
gttgttgcaacatgggataagcagttccacagttcacaaatggttcaaaaagttcctctt
ttgtatcttgcaaatgacatcttgcagaatagcaggcgtaaaggaaatgaatttgttgct
gaattttggaaagttcttccagctgctctcaaagatgttgctatgaagggtgatgatcat
gggaagaaagtggtgtctagattggttaatatatgggaagaacggagggtatttggatcc
catgcgattagcctaaaggatgtgatgcttggcgaagatgcagtgcccccccttgaattc
agcagaaaacgttcacgctctgttagaattatgaaacgagattcacggtcaattagaacg
aaattgaccattggaggtgcggctgaaaaaattatatcggcatttcacttggtgctaagt
gaatatcccaatgaagaggcagagatgagtaaatgcaagtctgcagttaatcgtattaga
aagatcgagaagaatattgacattgcctatactagtgcacaagagccaaaatgcaaacct
ttaacaaaagaactagaagaagaagagaatcttttgaaacagtgtattgagaaacttaaa
tcagttgaagctagtagactagcacttatatctcagctgaaggaagcccttcatgagcag
gaatccgaactggagaacattcgaactcaaatgcaggtagcagaggctcaggcagatgaa
gcctgcaacatacgagctcggctcaacaatggagactatttgtccaaaccatctattaaa
acggccctaccaattgatacgaattcaaaagctggagagacaccaaagaggacagctgct
gctatcgcagctgaggttgctgacaaacttgcagcctctagctcctctcagatgatcatg
cattcagttctttccacatttgcagctgaagaggcaaagaatgctggtctaacaaagggc
tccacagtgtccaagttaacatcttcatccgatgattcagtgatgaaatctgagaagtcc
ttgccaattatggatcttaatgcatttataccaacatcatctcttactgctccaccaaaa
cactcataccagtcggttatggtgccacaaccaagcatgcagaaccaggctcctagttct
caaggtcaatatcacattcttcctaatacaccttcacagcagtatctgcagccatcagga
gggatcatggccccttacgtgtatggcagtattcccccactgccgccggggccaccacca
ccacctccacctcatatgatgaatccaatgatgcctttgacacagcagccaatgcaaatt
actccacaacatccaattgcttcggcacagcagccacctccattagcctatcagcaacta
gcaccattaactcagcaaccaccggcaccaccaaattttcgaccacttcagccaccagga
atggtgtattatggtccgccacacctttctcagtga
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