Carica papaya (papaya): 110808841
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Entry
110808841 CDS
T05151
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110808841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110808841
Spliceosome [BR:
cpap03041
]
Complex A
U1 snRNP components
U1 related factors
110808841
Complex B
110808841
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Sigma_reg_C
Motif
Other DBs
NCBI-GeneID:
110808841
NCBI-ProteinID:
XP_021890152
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MQQAGQQTQALNTPSHTQQSSDWQEHTSADGRRYYYNKQTKQSSWEKPLELMTPMERADA
STVWKEFSTPEGRKYYYNKITKQSKWSMPEELKLAREQAQLAVSQGTQSETGATSQAPDA
VAVSLTETPATVSVVSSTPSIAPGVAQSPASVPPAVANPVQVALPGSVPQSAATSAIGVL
PPVVTVTPLPSAVATVNASTTMMSGFNNLTFQTALNTVDAASTQDIEEARKGMAVAGKVN
VTPLEDKTNDDEPLVYASKQEAKVAFKALLESANVQSDWTWEQTMREIINDKRYGALRTL
GERKQAFNEYLGQRRKLEAEERRMRQKKAREEFTKMLEESKELTSTMKWSKAVSLFENDE
RFKAVERVRDREDLFDNYIVELERKEREKAVEDHRRNIAEYRKFLESCDFIKVNSQWRKV
QDRLEDDERCSRLEKIDRLIGFEDYIHDLEKEEEEQKKVQKEQLRRAERKNRDAFRKLME
EHVNAGNFTAKTHWRDYCLKVKDLPQYQAVVSNTGGSTPRELFEDLAEELEKQVSTIYLL
FFDLGFARLLLVCFFCKVCINMETVDNAFTLLFSPNDLLFLSFLFSPLISGQGGL
NT seq
1786 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggctggccaacaaactcaggctttaaacacccctagccacactcagcaatcc
tctgactggcaagagcatacatctgctgatgggagaagatattactataacaaacagact
aaacaatctagctgggaaaaacctctggagttgatgacgccaatggagagggctgatgca
tcaactgtctggaaggaattttcaacaccagagggaagaaagtattattacaacaagatt
acaaagcagtccaaatggtcaatgcctgaggaattgaagttagctcgggaacaggctcaa
cttgcagttagccaaggaacccaatcagaaactggagcaacttctcaagctccggatgct
gttgctgtatctttgactgaaacgcctgcaacagtttctgttgtctctagcactccctca
attgcacctggagtggctcaaagtcctgcttctgttccacctgctgttgctaatcctgtc
caagtggcactccctgggtctgtgccacaatctgctgcaacaagtgcaattggagttctg
ccccctgtggtgactgtaactcctttgccgagtgcagttgcaactgttaatgccagcaca
acaatgatgagtggctttaacaatttaacattccagactgctctgaatactgtagatgca
gcttctactcaagacattgaggaagcaagaaagggaatggccgtagctggaaaagttaat
gtgacgcctctagaagataaaacaaatgatgatgagccattagtttatgccagtaaacag
gaggcgaaagttgcattcaaagctcttttggaatctgcaaatgtccagtctgattggaca
tgggagcagacaatgagagagattattaatgacaagcgatatggtgctttgaggactctt
ggggagcggaagcaagcatttaatgagtatttgggtcaaagaagaaaactcgaggccgag
gaaaggcgaatgagacagaaaaaggctcgggaagagttcacaaaaatgcttgaggagtca
aaggaactgacttcaaccatgaaatggagcaaagctgtaagtttgttcgaaaatgatgaa
cgtttcaaagctgttgaacgcgtgagagaccgcgaagatctctttgataactacattgtg
gagctagagaggaaggagagagaaaaggctgtggaggaccatcggcgaaatatagcagaa
tatcggaaatttttagaatcctgtgacttcatcaaggtaaatagccagtggcggaaagta
caagatcgattggaggatgatgaaagatgttcacgtcttgagaagattgaccgcttgatt
ggttttgaggattacatacatgacctggagaaggaagaagaggaacaaaagaaggttcag
aaggaacaattgaggcgggctgagaggaaaaatcgtgatgcatttcgcaaactcatggaa
gaacatgttaatgctggcaactttacagctaaaactcactggcgagattattgtttgaag
gtcaaggatttgcctcagtatcaagctgttgtgtcaaacacaggtggctcgacaccgagg
gaattgttcgaggatttggctgaagaattagagaagcaggtttccaccatttatttgtta
ttttttgatttgggttttgccagactacttctagtgtgcttcttttgcaaagtttgcata
aacatggaaacagtggacaacgcctttactctattgttcagtcctaatgatctacttttt
cttagttttttgtttagtcctttgatttctggccaaggtggtttga
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