Carica papaya (papaya): 110809296
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Entry
110809296 CDS
T05151
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110809296
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110809296
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
Helicases
110809296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
110809296
NCBI-ProteinID:
XP_021890774
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MGTPMEKPPKDDVPRQEEDDKEEGEEEKSFEELGLDPRLVRALIKKGIKKPTPIQQSAIP
FILEGKDVIARAKTGSGKTFAYLLPLLQKLFACSGLRKNRAPAAFILVPSRELCQQVYTE
VSSLIELCRVQLKVVQLTSSMSASDLRTTLAGLPDILVSTPACIPKCLSTGVLQSTAISD
SLEILVLDEADLLLSYGYEDDLKALTAVVPRRCQCLLMSATTSSDVEKLKKLILHNPINL
TLQEYRDKRDDPIPKNVQQFWISCSVHDKLLYILALLKLELVQKKILIFTNTIDTGFRLK
LFLEKFGIKSAILNAELPQNCSLHINEVFVYILFYNVXXXXXXXXXXXXXXXXXXXXXXS
KKSKKRAKPKLDFEFGVVRGIDFKNVHTVINFELPQSVTGYIHRIGRTGRAYNTGASISL
VSPDEMEVFEDINSFLRGDGEKESDTITPFPLLTENAVESLRYRAEDVAKSVTKIAVRES
RAQDLRNEILNSEKLKAHFETNPKDLDLLKHDKVLSKKPPAPHLRDVPDYLVDPKTQEAS
KIVKLARAAMGGNRSTTHHASRRRSRKSRDPLKTFSAEAPKKGRRGGTGEGKEAGGGRGR
KKQKSY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggtactccaatggagaagccacccaaagatgatgttcctaggcaggaagaagatgat
aaggaagaaggagaagaagagaagagctttgaggaattagggcttgaccctcgcctagtt
cgtgccttaataaaaaaaggaattaaaaagccaactccaatccagcaatcagctattcct
ttcatacttgaaggcaaagatgtaattgcccgtgcaaagactggttcaggaaagaccttc
gcctacctacttccattgttgcagaagctttttgcatgttctgggttaagaaagaatcgt
gctccggcagcattcattcttgtcccttctcgtgaattgtgtcaacaggtttacacagag
gtttcatcgctgatagagttatgcagagtgcaactgaaagttgtacagttgactagcagc
atgtctgcctctgatttgcggactacattggcaggattgcctgatattctagtttctact
cctgcttgtatacccaaatgtttgtctactggcgtgcttcaatctacagcaattagtgat
tctcttgaaattcttgttcttgatgaggcagaccttttattgtcttatgggtatgaagat
gacctaaaagcgctaactgctgttgtccctaggcgttgtcagtgtctcctcatgtctgcc
accacgagttctgatgttgagaaactgaagaagctgattctacacaatcccatcaatctg
actttacaagagtacagagataaaagggatgaccctattcccaaaaatgttcaacaattt
tggatttcttgcagtgttcatgacaagttactttacatccttgccctcttgaagctggag
ttggttcagaagaagattctgatattcacgaataccattgacacaggctttagattgaaa
ctattcttggaaaagtttgggatcaagtcagccattttgaatgcggagttgccacagaat
tgtagtcttcacattaatgaagtatttgtatacattttattttataatgtggnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcc
aaaaaatctaaaaagagagcgaagccaaagttggactttgagtttggagtagtgaggggc
attgacttcaaaaatgtgcacacggtcataaattttgaattgcctcaaagtgttactgga
tatatacatcgcatcgggcgtactggaagagcatacaacactggtgcctcaatctctctc
gtgtccccagatgagatggaagtttttgaagacataaactctttcttacggggtgatgga
gagaaggaatctgacacgatcacaccatttcctttgctcacggagaatgcagtggagtct
ttaagatacagagctgaggatgttgcaaagagtgtgacaaaaattgctgttagggaatca
cgagctcaggatttgagaaatgagattctcaactctgaaaagttgaaggctcattttgaa
actaacccgaaggatttagatctattaaaacacgataaggttttgagcaagaagcctcct
gctcctcacctgcgtgatgtgcctgactaccttgttgaccctaaaactcaggaagccagc
aaaattgttaagcttgccagagctgcaatgggtggtaatcgctctactactcaccacgca
tcaaggagaagatctagaaaaagtagagatcctctcaagacattctctgccgaggcgcct
aagaaaggccgcagaggtggaacaggggaaggtaaagaggcaggtggtggccgtggacga
aaaaagcaaaaatcttactga
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