KEGG   Carica papaya (papaya): 110809632
Entry
110809632         CDS       T05151                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110809632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110809632
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110809632
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_RIG_2nd RAWUL WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_Vps41 WDR90_beta-prop_4th VWA_3_C
Other DBs
NCBI-GeneID: 110809632
NCBI-ProteinID: XP_021891204
LinkDB
Position
Unknown
AA seq 761 aa
MHRVGSAGNTSNSVRPRKEKRLTYVLNDADDTKHCAGVNCLSLLKSSVTEGCDYLFSGSR
DGTLKRWSLGEDAATCSATFESHVDWVNDCILAGENTLVSCSSDTTLKTWDCLSDGAWTR
TFRQHSDYVTCLASAEKNSNIVASGGLGGEVFVWDIEAALAPLSKSSDATEDECSNGVNG
SGHPLPVTSLRTISSSNNISVHPSQPHGYVPISAKGHKESVYALAMNDSGTILVSGGTEK
VVRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTKEHPILQLALHDDNIWVAT
TDSSVHRWPADGRNPQKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYKEPTFTIAGTPA
IVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVEDYGKVSFEEKKEKLFEMVSIPAWFTV
DTRLGCLSIHLDTPQCFSAEMYSADLNITGKPEDDKVNLARETLKGLLAHWLIRRKQRSG
SQASANGDVPSGKDTATRSHTHSRIDMDGNADNDSIVYPPFEFSTVSPPSIITEGSQGGP
WRKKITELDGTEDEKDFPWWCLECVLNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSA
PRILRIHKVINYVIEKMVLDKPLESGTSEGTFAPGGQLQHPVVGDASFRSGLKPWQKIRP
AIEILCNNQVLSPDMSLATVRAYIWKKSEDLVLNYRMGQGR
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcaccgggtgggtagtgcagggaacacttctaattctgttcgtcctcgtaaggagaaa
cgactgacatatgtgctgaatgatgctgacgataccaagcattgtgcaggcgtaaactgt
ttgtctctattaaagtcatctgtcactgaagggtgtgattacctcttctctggaagccgt
gatggtacactaaagagatggtcattgggcgaagatgctgctacatgttctgctacattt
gagtcacatgttgactgggtaaatgattgtatccttgctggcgagaatacacttgtttct
tgttcttcggataccaccctcaagacatgggattgcttgtctgatggagcttggacgagg
accttccgtcaacattctgactatgttacttgtctggcttctgcagaaaaaaatagcaat
attgttgcctcgggtggtcttggtggggaggtttttgtatgggatattgaagctgcatta
gcacccctttccaagtcaagtgatgcaacagaagatgaatgttcaaatggtgtcaatggt
tctgggcatccattacctgtgacgagtttacgaactattagctcaagcaacaacatttct
gtgcatccgtctcaacctcatgggtatgtcccgatatctgccaagggccataaagagtca
gtttatgcattggcaatgaatgatagtggaaccattctcgtctctggtggaactgagaag
gttgtgcgtgtttgggacccaagaactggttcaaagactatgaagctaagggggcataca
gataacatcagggctctgcttctggactctactggcaggttttgtttatcaggatcttca
gattctatgatcagactctgggacctgggtcagcagcgatgtgtgcattcttatgctgtg
catactgattctgtttgggcacttgcaagcaccccaacatttagtcatgtttatagtgga
gggagagatctctctttatacttgacagacttggcaacaagggagagtcttttgctttgc
acaaaggaacatcccattctgcagttggcattacatgatgataatatatgggttgcaaca
actgattcttcagttcatagatggcctgctgatggacggaatcctcagaaagtctttcag
agaggtggttcgttcttggctggaaacttgtctttttcaagagcaagggtgtccttagaa
ggatctactccagttcctgtctataaagaaccaacctttaccattgctggaactcctgca
attgtgcagcatgaaattttaaacaacagaaggcatgtcttgactaaggatactgctggc
tcagtgaagctatgggagatcactaggggcattgttgttgaagactatggaaaggtttca
tttgaggagaaaaaagaaaaattatttgagatggtaagcatccctgcatggttcactgtg
gacactaggcttggatgcttgtccatacatttggatacacctcaatgcttctcagctgag
atgtattcagctgacctcaacattactggaaaacctgaggatgataaggttaacctagcc
cgtgaaacacttaaaggtctattggctcattggttgataagaagaaagcaaagatctgga
agccaagcatcagccaatggggatgttccctctggaaaggacactgccaccagaagtcat
acccattcaagaattgatatggatggcaatgctgacaatgactccattgtatatccacct
tttgaattttcaactgtttcgcctccttcaattattaccgagggctctcaaggaggcccg
tggagaaaaaaaataaccgaattagatgggaccgaagacgagaaggactttccttggtgg
tgtctagagtgtgtattgaataatcgcttacctcctagagaaaataccaagtgcagcttc
tacctgcatccatgtgaaggttcaactgtccagatcctcacacagggaaaactaagtgca
cctcggatattgagaatacacaaagtcattaattatgtcatagaaaaaatggtcctagac
aaaccactggaaagcggaacctctgagggaacctttgctcctggagggcaactacagcat
ccagtggttggagatgcctctttccggtctgggttgaagccttggcaaaagattaggcct
gctattgagatactatgcaataatcaggtcttatcaccggacatgagcttagccactgtg
cgggcatatatatggaagaaatctgaggacctggttcttaattacagaatgggccagggc
aggtga

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