KEGG   Carica papaya (papaya): 110809662
Entry
110809662         CDS       T05151                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110809662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110809662
   03041 Spliceosome [BR:cpap03041]
    110809662
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110809662
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110809662
Spliceosome [BR:cpap03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110809662
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_Nup35 BRAP2 SF3a60_bindingd
Other DBs
NCBI-GeneID: 110809662
NCBI-ProteinID: XP_021891244
LinkDB
Position
Unknown
AA seq 382 aa
MDAHQNEAVLDGETNNIRSPDHAEEEDKPQAHTGDGASPGKIFVGGLARETTSVQFVKHF
GKYGEITDSVIMKDRRTGQPRGFGFVTYADPTVVDKVIQDNHIINGKQVEIKRTIPKGMG
GSKDFKTKKIFVGGIPTTLNEDEFKDFFMQFGEVKEHQIMRDHSTSRSRGFGFITFDSEQ
AVDDLLKKGNRLEMTGTQVEIKKAEPKKPNPPPPPSKRHNDSRSSFGGEFGDTYAEFGGG
GFGAGGYGSGSFGGGSAIYRSGGAYGGRAGSYGGFGGGDFGGYGGYGGSVGAFRGEPSLG
YSSRYGGGSFNRGYEMGGSYGGAGELYGGYGGNSGGAGSRSAYGSGYDAGLGGGYGGGSG
GSFGSRGGYGGAGNSRYHPYGR
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggacgcacaccaaaatgaagctgttcttgatggagaaacgaacaacattagatcccca
gaccatgccgaggaggaggataagccccaggcgcacactggagatggagctagtccggga
aaaatttttgtcggaggtctagcaagggagactacttcagtgcaatttgtcaagcatttt
ggtaaatatggtgaaattacggattctgtgataatgaaggaccggagaacggggcaacct
cgtggattcgggtttgtgacttatgccgatcccactgtggttgataaagtcattcaggac
aatcatattatcaatgggaaacaagtggaaatcaagcgaacaatacctaaaggaatgggt
ggctccaaggatttcaagactaagaagatatttgtgggtggaattcccacaacactaaat
gaagatgagttcaaagatttctttatgcaattcggagaagtgaaagaacatcaaatcatg
cgggatcattccaccagtcgttctcgtggctttgggtttattacatttgactcagaacaa
gcagttgacgatctattaaagaaggggaaccggcttgaaatgactgggacacaggtggag
atcaagaaggcagagccaaagaaaccaaaccccccgcctcccccatctaagcgacacaat
gattctaggtcttcatttggtggtgaatttggggacacttatgctgaatttggtggtggc
ggatttggagctggtggatatggcagtgggagctttggtggaggcagtgctatttataga
tcaggtggtgcctatgggggcagagcaggctcctatggaggatttggtggaggtgacttt
ggtggttatggaggatatggtggaagcgtaggagcatttagaggtgaaccgtcccttgga
tattccagtcgatatggagggggcagctttaatagaggttacgaaatgggaggtagttat
ggaggtgctggtgagctttatggtggatatggtggcaatagtggtggtgctggcagtcgc
agtgcctacggcagtgggtatgatgctgggcttggtggtggttatggaggtggcagtggt
ggctccttcggaagtagaggaggatatggtggtgctgggaatagccggtatcacccttat
ggaagatag

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