Carica papaya (papaya): 110810079
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Entry
110810079 CDS
T05151
Name
(RefSeq) uncharacterized protein LOC110810079 isoform X1
KO
K14315
nucleoporin NDC1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110810079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110810079
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110810079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
110810079
NCBI-ProteinID:
XP_021891833
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MHSSSSPDMVVKNRKLGFLIWQFISSTSIFIIFKFLLLSPLLPPSKTPIIAAIFAFIVFN
ISQLLFSASFAFLSSPHPVRAASPLQLLLALLRPSSSSATDFRSSAKLSLSFLLFLAAAA
VSGFLAIGSVCCAYGVDGLQMIGRVGFRGFAFGFLYGLLYILKQRWILDFPIIQRPPFFS
FKMGLPSAITRALRLSGVYYLFSALLLVLLPDQIKSQLTMREFIYEEIVFYMGTFAVLLC
WELNHHLHKVLLTKRCVFAPPKGSAAAETNPSELLLATLEESPPASLLQYLAYLDLCMVC
QNNVDTWRRAAFFEETGETYKRVVAVCLRPLLQLASKLAESLECCSAGTYKQPNPLQQQQ
DPQSDLKFCESLNHFQDLDSGRMIDNDRMSSGLYLLQINASRRQTHNALYAWCAQAAASV
TAHSRKEDRLGVAQLSGSNAAIISTLLSCLLAVEAFMGKKTNLQPSHHFMGPAGIKWATL
SGGRREIKTLKKRGGSQYSKAYAIADVLRTSVYCVVCAFHDEMMTSAKGGSLDKDWVINT
KPLFGTHELLAQKLRLFLDFQAT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcattcatcgtcgtcgccggacatggtagtgaagaatcggaagctgggttttctaata
tggcaattcatttcttctacttccattttcatcatcttcaagtttttgcttctctctccc
ttgctacctccttccaaaacccccattatcgccgccattttcgccttcatcgtcttcaac
atttctcagctcctcttctctgcttctttcgccttcctttcctctccccatccagtacgc
gcggcttctcccctgcaactccttctcgctctcctccgcccctcctcatcctcagccact
gacttccgctccagcgccaagctctcgttgagcttcctgctgtttctcgcggccgcagcg
gtttctggattcctcgctataggctccgtttgctgtgcttatggtgtcgacggattgcag
atgattgggagggtggggtttaggggttttgcctttggcttcctctatggattgctttac
atcttgaagcaacgatggattttggatttccctattattcagcgtcctccctttttcagc
tttaagatggggctcccttcagctattacgcgagctctaagactttctggggtatattac
ctgttttcagctctgctgcttgtgcttctgcctgaccagattaaaagtcaattgacaatg
cgggaattcatttacgaggagattgtattttacatgggaacttttgctgtgcttctctgc
tgggaattgaatcaccacttacataaggtactgcttactaaaagatgtgtatttgcacca
cctaaaggatcagcagcagctgaaacaaatccaagtgagcttcttcttgcgactttggaa
gagagccctcctgcttcccttctacagtatcttgcatatcttgatctctgtatggtttgt
cagaataatgttgacacctggaggcgagctgccttctttgaagaaactggtgagacatac
aaaagagttgtagctgtatgtttgaggcctctgttacagcttgcatctaaattggccgaa
agtttagaatgttgttctgctggaacctataaacaaccaaatccactgcagcagcagcag
gatccacaatcagatttgaagttttgtgaatcactgaaccatttccaggacttggactcg
gggaggatgattgacaatgataggatgagctcaggactatacctacttcaaatcaatgct
tctagaagacaaactcacaatgcactctatgcatggtgcgcccaggcagctgcctccgtg
actgcacattcccgcaaagaagacagattaggagttgcacaactctctggaagcaatgct
gctattatctcaacacttctctcttgcctgcttgctgttgaagcattcatgggaaagaag
acaaacttgcaaccgtctcatcatttcatggggcctgccggtattaaatgggctacgtta
agtgggggaagaagagagatcaaaactcttaaaaagagaggtggatctcaatattcaaaa
gcatatgccattgcggatgttctaagaacctcagtatactgtgttgtgtgtgctttccat
gatgagatgatgacaagtgcaaaaggaggctcgctagacaaagattgggttattaacaca
aaacctctttttggaacacatgaactgctggcacagaaactgcgactttttctcgatttt
caggcaacttaa
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