Carica papaya (papaya): 110810219
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Entry
110810219 CDS
T05151
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110810219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpap03032
]
110810219
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110810219
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110810219
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110810219
BRCA1-C complex
110810219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
110810219
NCBI-ProteinID:
XP_021891998
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All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MVWGLFPVDPLSGEDKYYIFAKGIFKVGRKGCDIIIKKDKGVSRIHADIIVDAMTSLNPL
ANKSSKVSSNVRIKDESKYGTFVTSEFGTKEKVNELPNKEKVLKDGDMITFGTINANYRF
CFVPFIFFICCSDQSQKNHSVQDKISSIGASVTSMLSQECTHVLVDQNMLVDMDLVNAIV
AKKPLVQTSWLEFMTGQRIGTEIPSCSGYTPSVTVGGVSVKVADAKARGNCLEGYTFLLE
SRCTYKFGDRFRFLLEVGGGKTLSTEEFSSNSQDSEYGEMTRVVYVISKGSANKFDCVNK
LSSLSRVNEMDLICAVLSGNLDPSVLISPCVFISSSCSTDETVVAESDVEGETAASVPAT
HVVASKDTPRSPRKAGSIDPEASRSDDKTDMIIVRENTSGMVAIRDRVDESGYAKVDDSG
GMVARRDRVDESGYAKVDDSGGMVAIRAKFDESEDGNLDIIYSQDLIVRDSKLTLTVSSM
ANKEVVNFKRFRKMHTEPGNSFGSLIPFSKYPYKDSDYENGTMAESVKEEKKRKQMEAIA
EDLFNSEKGRRRGVAGSIHGLLTRS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggactctttcccgtcgatcctctttcaggtgaagataagtactacattttt
gcaaagggcattttcaaagtgggtcgaaaaggttgtgacataattatcaaaaaggacaag
ggagtatctcgaattcatgccgatattattgttgatgccatgacttccttgaatcctcta
gcaaataaatcttctaaagtgtcctcgaatgtccgaatcaaggatgagtcaaagtatgga
acatttgttacatcagaatttggaaccaaagaaaaggttaatgagctcccgaataaggaa
aaagttttgaaagatggagacatgattacatttggaactattaatgcaaactacaggttt
tgttttgtcccattcatatttttcatctgctgttcggaccagtctcagaagaatcattca
gttcaagataaaatttcttcaattggtgcttctgttacttctatgctgagccaagagtgc
acccatgtgcttgtcgaccaaaacatgctagttgacatggatctagttaatgctattgtg
gctaagaaacctttggttcaaaccagttggctggagtttatgacagggcaaaggattggc
actgaaattcctagctgcagtggctatactccgtcagtaacagtaggaggagtatcagtt
aaagttgcagatgcaaaggctcgtggaaactgtttggaaggatacacatttttgttagag
tcaagatgcacgtacaaatttggagacagattccgttttttactggaagttggtggtgga
aagactctatccactgaggaatttagttccaatagccaggactcagagtatggagagatg
actcgtgtagtgtacgtcatatcgaaaggatcagcgaacaagtttgattgtgtcaacaaa
ctcagttcattatctagggtgaatgagatggatttaatatgtgctgtcttatctggaaat
ctggatccttctgtcttgatatcaccatgtgtgtttatatcatcatcatgctccacggat
gagactgtggtagcagagtctgatgtggaaggagaaacagctgcttcagttcctgcaact
catgtggttgccagcaaagacacccctaggtctccgagaaaagctggatctatcgaccct
gaagcttctagatcagatgacaagactgatatgattattgttagagagaacaccagtggt
atggttgcaataagagatagagttgatgaatctggatatgcaaaagtagatgatagtggt
ggtatggttgcaagaagagatagagttgatgaatctggatatgcaaaagtagatgatagt
ggtggtatggtagcaataagagcaaagtttgatgaatctgaggatggaaatttggatatt
atatacagccaggatttaattgttagagattcaaaattgactctcacagtcagttctatg
gcaaataaggaagttgtaaatttcaaacgcttcaggaagatgcacactgaacctgggaac
agctttggtagtcttattcctttctcaaaatatccatacaaagattctgactatgaaaat
gggaccatggctgaatctgtgaaagaagagaaaaaacggaagcagatggaagctattgct
gaagacttatttaacagtgaaaagggaagacggcgtggtgtagctggctccattcatgga
cttcttactcgcagttaa
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