Carica papaya (papaya): 110810367
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Entry
110810367 CDS
T05151
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04120
Ubiquitin mediated proteolysis
cpap04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110810367
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110810367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110810367
Enzymes [BR:
cpap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110810367
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110810367
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110810367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_DCAF12
EIF3I
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_like
Beta-prop_WDR75_1st
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
110810367
NCBI-ProteinID:
XP_021892217
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MGALHWSDFPKTSILSISYEWEMQNFPTGFHLSCQNQRKEQEKRKIQQHGGNGSGDEDKN
QQVAKDEDQDDREKPRCEWDFNLCTVVSSTTDAAAGSDAVGAIEFDPTNTLVATGGIARK
IRFYSLNSLLPQETSHGELNTASLDHISACEYYICTPAKLSNLRWKPGSAGRVLGSGDYD
GVVTEYDLERKVPIFERDEHGGRRVWSVDYSHWDPVVGASGSDDGTMQIWDTRCGNHRDG
GRCVAKVQPSKASNSVCCVEFDPSGGAMVAVGCADRKAYAYDIRKMVEPVLVLDGHSKTV
SYVRFLDFHTIVTAGTDGCLKLWNMDDSRLVRTYKGHVNSRNFVGLSVWRHGGLLGCGSE
SDQVFVYDRRWGEPIWVHGLEPVALEGRARGGRFVSSVCWHQVCEDHCTLVAGGSDGVLQ
MYVGKRKPVSSNSLFVAPN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggagcccttcattggtccgatttcccaaaaacctcaattctctccatttcatatgaa
tgggaaatgcaaaacttccccacaggattccatctttcctgccaaaatcaaagaaaagaa
caagaaaaaagaaaaatacaacaacatggaggcaatggtagtggagatgaagataaaaac
caacaggtagcaaaagatgaagaccaagacgatcgagagaagccaagatgcgaatgggat
ttcaatctttgcaccgttgtctcctccaccaccgacgcagcagccggttccgacgccgtt
ggagccatcgaatttgaccccactaatacccttgtagcaaccggtgggatcgcgagaaaa
atcagattttacagtttaaactccttgttgccgcaagaaaccagccatggtgagctcaac
acagcctcgttagatcatattagtgcatgcgagtactacatctgtacaccagccaagctt
agcaacctgcgatggaagcccggttcggccggccgggtactaggatccggagactacgac
ggcgtagtcaccgaatacgacctggagagaaaagtgcccatcttcgaacgcgacgagcac
ggagggcgtcgagtctggagcgtggactattcgcattgggatccagtcgtcggggcttcc
gggtccgacgacgggaccatgcaaatatgggatacacgttgtggtaatcaccgcgatggc
ggaagatgcgtcgctaaggtgcagcccagcaaagcgagcaactcggtttgctgcgttgag
ttcgatccgtccggcggagccatggtggctgtcggatgcgccgaccgaaaggcatacgcg
tacgatataagaaaaatggtggaaccagttctggttctcgacggtcacagtaaaacggtg
agctacgtccggttcctggattttcatacaatcgtaacagctggtacagatgggtgttta
aagctatggaatatggacgactcgaggctggtgcgcacgtataaaggacacgtgaacagt
cgcaactttgtggggctgtcagtgtggagacatggtgggttgctgggatgcggatccgag
agtgaccaagtgtttgtttacgataggcggtggggagagcccatttgggttcatgggctg
gagccggtggctctggaggggcgcgcgcgaggaggaaggttcgtgagtagtgtgtgctgg
catcaagtgtgcgaggaccattgcacgcttgttgctggaggatccgatggggttttgcag
atgtatgtgggcaaaagaaagccagtgtcatctaattctctatttgttgctcctaactag
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