Carica papaya (papaya): 110810368
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Entry
110810368 CDS
T05151
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110810368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110810368
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110810368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
110810368
NCBI-ProteinID:
XP_021892218
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MVFGREMVASTVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGIL
LVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLRRKLTSKLGANSPGLVPDWQIGE
CVAIWWRPNFETIMYPYCPPHITKPKECKKLFVVHLAEKEYFAVPKNLKLLAVPLFELYD
NVQRYGPVISTIPQQLSRFQFNMISS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgggagagaaatggtagcgtcaacggtggtcaacacgtatccactctctagc
tataccttcgggacgaaggagccaaagatggagaaggacacctctgtggccgatcgtctt
gctcgaatgaaagtcaactatatgaaggagggtatgaggaccagtgttgaagggatttta
ctggtccaggaacataatcatcctcacatacttcttcttcaaattgggaatacattctgc
aaacttcctgggggacgactgaagccaggagaaaatgaaattgagggcttgagaagaaag
ctaactagcaagcttggagctaattctccaggtcttgtgccagactggcagattggtgaa
tgtgtggccatctggtggcgaccaaactttgagacaatcatgtatccttattgccctccc
cacatcacaaaacccaaggagtgtaagaagctttttgtagttcatctggctgagaaggag
tactttgcggtgcccaaaaatttgaaactccttgctgtaccattgtttgaactctatgat
aatgttcagagatatggacctgttatatcaaccattcctcagcaactttctagattccag
ttcaacatgattagttcatga
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