KEGG   Carica papaya (papaya): 110810468
Entry
110810468         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110810468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110810468
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    110810468
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 LIG3_BRCT IMS_HHH POLH-Rev1_HhH PTCB-BRCT UBM DUF1805
Other DBs
NCBI-GeneID: 110810468
NCBI-ProteinID: XP_021892358
LinkDB
Position
Unknown
AA seq 1140 aa
MSFASSRSGNSGQKSKRSFNSNSANNDSDSSNGSKKKKSSQKTLGMAWGANSLSSSRSSF
RKSPFSDFGSYMGEKIRKLDNQFAAEASNYSHRGSSSEKPIFHGVSIFVDGFTIPSSQEL
RGYMLKHGGRFENYFSRHRITHIICSNLPDCKIKNLRSFSGGLPVVKPTWILDCVAANKL
LNWVAYQLDQLPDNQPKLSAFFAPRSIPVSMDRGALMDTIYQEKLENMDPSKHAGTSECT
NSSEVGISMKQISVPEDTDATMIEESRSTNTEYDGVKVEEPSYVEVEEQTDVKTELQSCV
QQPSSLDRYYSHNQNKEGSSISMVAGPSNKCHSILGDPNFVENYFKNSRLHFIGTWRSRY
CKRYPISSSGFKSTSSHQGGSDARKATIIHIDMDCFFASVAIKNRPELQDRPVAVCHSDN
PKGTAEISSANYPARAYGISAGMFVRDAKALCPHLVILPYNFEAYEEVADQFYDILHKHC
SKVQAVSCDEAFLDVTDLESEDPELXXXXXXXETTGCSASAGIAXNMLMARLATRAAKLL
DNAISFXEGMFGNVIVDEYLHQLPITVLPGIGYALEQKLKAQNILTCGQLRLISKESLQK
DFGMKTGEMLWNYSRGFDNRLVGTIQESKSIGAEVNWGIRFRNWQDSQHFLLSLCKEVQL
RLHGCGVQGRTFSLKIKKRRKDAKEPAKYMGCGDCENLSHSVTVPVATDDLEVLQRITKQ
LFGSFHLDIKDIRGIGLQVSKLERADAFKQVLERNTLKSWITSPSAKTEQCHLDVIDEER
SKEEASAVHSGLVCSDVIASSAEGGNNLSMSETSDQVSSLPPLCNLDMGVVECLPPEVLA
ELDETYGGKLVGFIAENKDFCKHMANPLHRLPHKRTEGQIVEEKASLLSDMSSLNQIPAA
KFAWYIYHAKQHPAAELPPVTDSWTRSCNETTCTLALKETDLMPLSLSQVDSSVLHQLPE
ELRADILDSLPEHRRQVCLPDTLRPDAEKPQESLDIRVTENESRSIDSVLSKSLWIGNPP
RWVDKFKASNFLMLNVLAEMYYRSRSTEKLSSILQCTISEPQHPEDASCDVRDEAIYSLC
EVFKQYIKLNIEVDLEEIYICFRLLKRLTIKSEFFLQVFNIVLPYLQASVGEHYGGDLRL
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgagtttcgcttcttcgcgctcaggaaattcagggcaaaaatccaagaggagcttcaat
tcaaattctgcaaataatgacagtgatagtagtaatggtagcaagaagaagaaaagcagc
cagaaaaccctaggcatggcatggggggccaattctctatcctcttcacgctcttccttt
cgcaaatctcccttctccgatttcggaagttacatgggggaaaagataagaaaactagat
aaccagttcgctgccgaggcttcaaattattcccatcgtggttccagctctgagaaacct
atatttcatggcgtttcaatctttgttgacggtttcacgattccttctagtcaggaactg
cgaggctacatgttgaagcatggtgggcggtttgagaattacttttccaggcatcgaatt
actcatatcatatgcagcaatcttcctgactgtaaaattaagaatctgaggtccttcagt
ggtggactcccggtcgtgaaacccacatggattttggattgtgttgctgcaaataaactt
ttgaattgggttgcctaccagctcgatcaacttcctgataaccaaccaaagttgtctgcg
ttttttgctccaaggagcatcccagtctctatggataggggtgctttgatggacactata
tatcaagaaaaacttgaaaatatggatccatctaaacatgcgggcacatcagagtgcaca
aattcatctgaagtgggaatatcaatgaaacagatctctgttcctgaagacactgacgca
actatgattgaggaatcaagaagtactaatacagaatatgatggagtaaaagtggaggaa
ccaagttatgttgaagtagaggaacaaacggatgtgaaaactgaattgcaatcatgtgtc
caacaaccttcttctcttgacagatattactctcataatcaaaataaagaagggtcatca
atttcaatggttgctgggccgtctaacaagtgccattcaattcttggagatcctaatttt
gttgaaaattattttaagaattcaaggctgcacttcataggaacctggagaagccgttat
tgtaaacgttaccccatttcgtcaagtgggtttaagtctacgagctctcaccaaggtggt
tctgatgctcgtaaggctactattatccatattgacatggactgcttctttgcctcagtg
gctatcaagaatcgtcctgaattacaggacaggccagtagctgtttgtcattcagataat
ccgaaaggaactgcagaaatttcttctgcaaactatcctgctcgagcttatggaatttcg
gcaggaatgtttgttagagatgccaaagctctttgtccccaccttgtcattttgccatat
aattttgaagcttatgaggaggtggctgatcagttctatgatatcttgcataagcactgt
agcaaagttcaggcagtaagctgtgatgaagcatttttagatgtaacagacttagaaagc
gaagatcctgagcttnnnnnnnnnnnnnnnnnnnnngagactactggatgtagtgcaagt
gctgggatagcangcaatatgcttatggcacgccttgccacaagagctgccaaactgctg
gacaatgcaatatccttctgagaaggtatgtttggcaatgttattgtggatgagtacttg
catcaattgccaattactgtacttccagggataggttatgctttagagcagaagttaaag
gcacagaatattttgacttgtggacagttacgattgatttccaaggaatctctccaaaag
gattttgggatgaaaactggtgaaatgctctggaattacagtagaggatttgataatcga
cttgttgggacaattcaggaaagcaagtctattggtgctgaggtgaattggggtatcaga
tttaggaattggcaagatagtcaacattttctcttaagcctttgcaaggaggttcaattg
cgcttgcatgggtgtggagtgcaagggcgtactttctcacttaagataaaaaagaggcgt
aaagatgcgaaagaacctgcaaagtatatgggttgcggagactgtgaaaacctaagtcac
tctgttacggttccagttgctactgatgatctagaagtgcttcagaggataaccaagcag
ctttttggttcatttcacttggacattaaggatattcgaggtattggcctgcaagtttcc
aagcttgaaagagcagatgcctttaagcaggtacttgagagaaacactctaaaatcatgg
atcacttcaccctctgcaaaaacagaacaatgtcatcttgatgtgatagatgaagagagg
agtaaagaagaggcttctgctgttcattctggcctggtatgctctgatgtgattgcaagt
tcagctgaagggggcaataatctatccatgagtgagacgtcagatcaggtttcatcccta
ccacctttatgtaatcttgatatgggagttgtagagtgtcttcctccagaagtcctggca
gaattagatgaaacttacggtgggaagttagttggtttcattgctgaaaataaagatttc
tgcaagcacatggccaatcctttgcacaggcttcctcataaacgaactgagggtcaaatt
gttgaagaaaaggcttctctgttatctgatatgtcctccctgaaccaaataccagcagca
aagtttgcttggtatatttatcatgcaaaacagcatcctgcagccgaactgccaccagtg
actgattcatggaccagatcctgcaacgagacaacttgtactttggctctgaaagaaact
gatttaatgcctttatctcttagtcaagtagattcctctgtattgcaccaattgcctgaa
gagttgagagcggacatacttgactcgcttcctgagcaccggaggcaagtgtgtcttcca
gatactctcaggcctgatgcagaaaaaccacaggaatcattggatattagggtaactgaa
aatgaatctagatcaattgattctgttttaagcaagagtctttggattggaaatcctcct
cggtgggttgataaattcaaagccagcaattttttgatgctaaatgttctggcagagatg
tactacagatcacggtcaactgagaagttatcttcaatattgcaatgtactatttctgaa
cctcaacatcctgaagatgctagttgcgatgttagggatgaagctatttacagcttatgc
gaggttttcaagcagtatattaagttaaatatagaggtggatcttgaagagatatatatt
tgtttccgacttcttaaaaggttaacaataaagtctgaattctttctgcaagtgttcaat
attgttttaccttaccttcaggcatctgttggtgaacactatgggggagacctccgttta
taa

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