Carica papaya (papaya): 110810672
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Entry
110810672 CDS
T05151
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03030
DNA replication
cpap03410
Base excision repair
cpap03420
Nucleotide excision repair
cpap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110810672
03410 Base excision repair
110810672
03420 Nucleotide excision repair
110810672
03430 Mismatch repair
110810672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpap03032
]
110810672
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110810672
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110810672
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110810672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
RFC1
AAA
RCF1-5-like_lid
AAA_30
AAA_22
PTCB-BRCT
AAA_19
Rad17
AAA_assoc_2
nSTAND3
BRCT_2
AAA_16
AAA_24
Gp44_lid
Zeta_toxin
AAA_5
AAA_14
RuvB_N
Sigma54_activ_2
AAA_18
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
110810672
NCBI-ProteinID:
XP_021892598
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MSDIRKWFMKSHNKGNDSASKADSTLQSNSDPSAKVSKPALTKLEPVQGGQESSGRRKTS
KYFATDKQKPQDEKRVEEVPVKRKLQNDSKESLKPPPLKKHNKIDDEDDDFVLSKSKKNH
DDATPSKKLKSASGRGVPQKTVDVDQTDEDDVKDAASPSKPGGRGRGGRGALGAPSGGRG
RGGGRGGFMNFGERKEPPHKGEKEVPEGARDCLAGLTFVISGTLDSLEREEAEDLIKRHG
GRVTGSVSKKTNYLLCDEDIVGRKSSKAKELGTLFLTEDGLFDMIRASKPVKAALQGKSN
NLVEKPAASLTKKSPCKVEVKSKSEGTKASSKRSASEISTLKQKRQTTPDSSLSWTDKYK
PKVPNEIVGNQSLVNQLHAWLERWHNQFSNAGSKGKGKKQSDSGAKKAVLLSGAPGIGKT
TSAKLVSQMLHFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALGAGMDRSKH
PKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNYR
KPTKQQMAKRLMQVAKAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDI
RRRLLSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLLIQENYINYRPS
SVSKDDSGVKRLGLLARAAESIGDGDIINVQIRRYRQWQLSQSSSVASCIIPYVSFQLYK
IKLTLFKSFFGTLNLLPTLMPTTRERNVIVAIGSMRSLAIGRRETLRLEHLTLLLKRLTN
PLRMLPKVGNPFSFFIILCRIHECLLISRRTLTLCGVIKVTGTSKPAGGIAPAVKAALTR
AYNEGSKLRMVRAADLVSLPGIKKAPRKRVAAMLEPSNDGPSEENGSALAESEEENTSDA
EDLGTTDGEKLQTELQSLNSKGIEVQVDLKGTGKSSAKKASAGRGKGGSASAEKKSGGRG
SGAAANKRKR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattagaaagtggtttatgaaatcccataacaagggaaatgacagtgcatcg
aaagctgacagcactctacagagcaactccgatccttcagcaaaagtttcaaagcctgca
ttgaccaagttggagccagtgcagggaggccaagaaagttccggaagaaggaagactagc
aagtattttgctactgacaaacaaaagccacaagatgaaaagagagtcgaggaagttcca
gtcaagagaaaacttcagaatgattctaaggaatcattgaagcccccgcctttgaagaag
cacaataaaattgatgatgaggatgacgattttgtcttatccaaatccaaaaagaaccat
gatgatgcaactcccagtaagaaattgaagagtgcgtcaggtagaggagttccgcaaaag
actgtagatgttgatcaaactgatgaagatgatgttaaagatgcagcgtctccttccaag
cctgggggaaggggccgcgggggtagaggtgcacttggggcaccatctggtgggagaggc
cgaggaggtggacggggtgggtttatgaattttggggagcgaaaagagcctccacataaa
ggagaaaaggaagtccctgaaggtgcgcgtgattgcttagctggtttaacatttgtaatt
agtggaacacttgacagtttggaaagagaagaagcagaggatttaattaagagacatggt
ggccgtgtcactggctctgtcagcaagaaaacgaattatcttttatgtgatgaagacata
gtgggacggaaatctagcaaagccaaggaacttggcacgttgtttcttacagaggatgga
ctttttgatatgatccgtgcatcaaagcctgtcaaagcagcgttacaaggaaaatcaaac
aatttggtggaaaaacctgctgcatctttgacgaaaaaaagcccttgtaaagtagaagtg
aagagtaaatctgagggtacaaaagcatccagtaaacggtcggcttcggaaatctctact
ctgaagcaaaaaaggcaaactactcctgattcttccctgtcatggacagataaatataag
cccaaggttccaaacgagattgttggaaatcaatcactggttaaccagcttcatgcttgg
ttagaacgttggcacaatcaattttctaatgctggaagcaaagggaaaggcaagaaacaa
agtgattctggtgccaagaaagcagtgcttttaagtggagcacctggtataggaaaaact
acatcagcaaaattggtcagtcagatgcttcatttccaggcaatcgaggttaatgctagt
gacagtcgtggaaaggctgatgctaagatctctaaaggaattggtggaagcaatgcaaat
tcgataaaggaattggttagcaatgaagcgttgggtgctggcatggatcgttcaaagcat
ccaaaaactgtgctcattatggatgaggttgatggaatgtctgctggggatagaggtgga
attgctgatcttatcgctagcattaagatttcaaaaattcctataatttgtatctgtaat
gaccgctacagtcagaaactgaaaagtcttgtgaattactgcttgcttctcaattaccgg
aaacctactaaacagcagatggctaagaggttaatgcaagttgcaaaagcagaaggcctt
caagttaatgagattgctcttgaggagcttgctgaaagagtgaacggcgacatgcgcatg
gcactaaatcagttgcagtatatgagtctgtccatgtcagtgattaagtatgatgacata
aggcggcgccttcttagcagctcaaaagatgaagatatttcaccatttacagctgttgat
aaactgttcgggtttaatggggggaggctgaggatggatgagcgcattgacctgagcatg
agcgatcctgatctagttcctcttcttattcaggaaaattatattaattataggccaagt
tcagtcagcaaagatgacagtggggtcaaacgtttgggcttgcttgcccgtgctgctgag
tctattggagatggagatataataaatgtgcagattcgaagatatcgacaatggcaactc
tctcagtctagttcagttgcatcctgtattattccgtatgtctcctttcaactttacaag
ataaagttaactctttttaaatcattttttgggaccctaaatctgctgccaacactaatg
ccaacaacaagagagagaaacgtcatagtagccattggctcaatgcgatcccttgccatt
ggtagaagggagactcttcgacttgagcatcttacacttcttctgaaacggttgacgaac
ccacttcggatgctgcctaaggttggaaatccattttctttcttcattatattatgtaga
attcatgaatgtttactcattagcaggaggactttgacactatgtggggttatcaaagtt
acagggacatccaaacccgctggaggtattgcaccagctgtgaaagcggctttgacgaga
gcatacaatgaaggaagtaaattaaggatggttcgtgctgctgatttggtatctcttccg
ggaattaaaaaagcccctcggaagagggtggctgcaatgttagaaccatccaatgatgga
ccgagcgaggagaatggtagtgcattggcagaaagtgaagaagaaaacacttcagatgct
gaagacttggggactactgatggggagaagctgcagacagaacttcagagtttgaattca
aaaggaatcgaagtccaagtcgacttgaagggcacaggaaagtcaagcgccaagaaggca
tcagcaggcaggggaaaaggaggttctgcatccgctgagaagaaaagtggcgggcgaggt
tcaggcgctgctgctaataagagaaagagataa
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integrated database retrieval system
