KEGG   Carica papaya (papaya): 110810725
Entry
110810725         CDS       T05151                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03030  DNA replication
cpap03410  Base excision repair
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110810725
   03410 Base excision repair
    110810725
   03420 Nucleotide excision repair
    110810725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpap03032]
    110810725
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110810725
Enzymes [BR:cpap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110810725
DNA replication proteins [BR:cpap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110810725
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110810725
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE RPN1_RPN2_N
Other DBs
NCBI-GeneID: 110810725
NCBI-ProteinID: XP_021892679
LinkDB
Position
Unknown
AA seq 532 aa
MSGQIRKKIQKKFKIRGYSLKVDALDEILSFVNQFPDAEEEAIDLLLDNLQLETLKSSVI
DKEPIKRVVSLLLEADGATVDESPGPASSRSAIRVTDAFLVPKFRYDLVKKQFYEYTGRL
PVHGEASSKAAVYKDRFLLLFQRVSRDEHFSRPAFDTELSHFGSCEISPIQSLVIHKGRR
WVMGLISQLEDGHFYLEDLTASVEVDLSKAKITTGLFTENTIVVAEGEMQSDGIFQVITC
GFPPLEDRDKSLKSHAGLDFFGGGALTKEETLRLADLERRAVNDMFVIISDIWLDNDEVM
GKLATILDGFENVEVVPSLFVFMGNFCSHPCNLAFNSYSSLRLQFGKLGKMIEAHPRIKE
HSRFLLIPGPDDAGPSTVIPRCALPKYLTEELSNTVPNAIFSSNPCRVKFYTQEIVFFRQ
DLLYRMRRSCLITPSTEETEDPFEHLVATLTHQSHLCPLPLMVQPIIWNYDHSLHLYPTP
NTIVLGDKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQESRAFRLVIII
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgagtgggcaaatcaggaagaagattcagaagaagttcaagatcagaggttacagtctc
aaggttgacgctctcgacgagatactctcttttgtcaatcagttccccgacgccgaggaa
gaggccatcgatctcctactcgacaatctccaactcgaaactctcaaatcttctgtgata
gataaggagcccatcaaacgtgttgttagcttgttgctagaagctgatggagccactgtt
gatgaaagccctgggcctgcttcttcccgttcggccattcgcgtaactgatgcctttttg
gtgcctaaatttcgatatgatctcgttaagaagcagttttatgaatatacaggcaggctt
cctgttcatggagaggcatcttcaaaagcagctgtgtacaaggacaggtttcttttgcta
tttcagagggtctctcgtgatgagcatttttctagacctgcttttgatactgaattatca
cattttgggagctgcgagatatcaccaattcaatctctggttattcataaaggaagaagg
tgggtcatgggcttgatatcccagctggaagatgggcacttctacttggaagaccttaca
gcttcagtagaagtcgatttgtctaaagcaaaaataacaacaggattattcaccgagaat
actatagttgtggcagaaggtgaaatgcagtcagatggcatttttcaggtaattacatgt
ggttttcctcccctagaggacagagataaatcactcaagtcacatgctggactggacttc
ttcggtggtggtgcactaacaaaagaagagacacttagacttgcagatttagaaaggaga
gcagtgaatgacatgtttgttattatctctgatatctggttggacaatgatgaggttatg
gggaagctggcaacaatccttgatggttttgagaacgtggaggttgttccttcgttgttt
gtcttcatggggaatttttgttctcacccatgtaacctagcctttaattcttattcaagc
cttagattgcagtttggcaagctagggaaaatgattgaagcccatccgagaataaaagag
cacagtcgatttctgttgattccaggtcctgatgatgcaggtccatcaacagttataccc
aggtgtgccttaccaaaatatctaactgaagagcttagcaacactgttcctaatgccatt
ttttcaagtaatccttgcagagtcaagttctacacccaagaaattgtattttttcgccag
gatctgctttataggatgcgtcgttcctgcttgataaccccttcaacagaagaaactgaa
gatcctttcgagcatcttgttgctaccttaactcatcaaagtcatctctgccctctccct
cttatggtacaacctattatctggaattacgaccactctctccatctctatccaacccct
aatacgatagtattaggtgacaaaagcgagcagaaggcattcaaatacacaggaataact
tgcttcaatccaggttcgttttcatctgacagcacctttgtagcgtaccgcccttgcacg
caggaaagtcgagctttccgccttgtgattatcatttag

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