Carica papaya (papaya): 110810873
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Entry
110810873 CDS
T05151
Name
(RefSeq) uncharacterized protein LOC110810873 isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpap04131
]
110810873
Membrane trafficking [BR:
cpap04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110810873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_C
Vps62
Motif
Other DBs
NCBI-GeneID:
110810873
NCBI-ProteinID:
XP_021892865
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MPSGDMKPVKVPVSKNMLDSHIREELSRKGGRMVTVAIKDAQFPGVAGLASHQYTVAIRL
TQDQSACGESFLHQQSARTSGSISNYSCSELEVVNWSEVFFFKVDSPEFYMLELIVTNMG
RGDPVGFFSAPLNQIAESSDQYDYVDGLTWMDLSPAESMRMTQEDKSKKCGKIRFSVLLS
PQPEIEENNKSFFLGARKSGLIQISPTMEGPWTTVKLNYATPAACWRLGNDVIASEVSVK
DGNRYMTIRSLVAICNNTDFLLDLCLIPKADTTTQDIYVGLLKPGDSVSLPLSGLTQHGL
YVLKLRPAGLDGPEEYSWSSVVANSREQKSCDEICVSTLARSEDLLCCTQMNGSSSRVPH
LLWFCVSTQAVEIAKDIHSEPIQDWTILLKSPLSITNNLPLESEYSVLERQATGHFLVCN
RGIFGPGKTVNVYNADIRNQLFFSLLPQRGWLPIHEAVIISHPQGIQSKTIEFRSSATGR
IVQVILEQNYDKDRPLLAKIIRIYAPYWFAIARCPPLTLKLLDLTVTKQTRKIGFPFQYK
KNKEILLEEITEEEIYEGHTIASALNFKFLGLSVSIAHSGDGQYGPVKDLSPLGDMDGSL
DLYAYAADGKCMRLFISTKPCPYQSVPTKVISVRPFFTFTNRLGEDIYIKLSSDDEPKKL
HTVDSRVSFLYHESGGREELQVCLEDTEWSFPVQIVKEDTITLVLRRHNGTRRFLRTEIR
GFEEGSRFIVVFRLGSTNGPIRIENRTTDKTIGIRQSGFGDKSWIQLESLSTTNFSWEDP
YGQKVIDAKIDSGFSSRICKIDMESIGLSSEVQRELGMQFHVVETGDIKVLKFTNDCIPA
SSGEGNSSVVASGNLGNSQLQSVTESDITTLELIVELGVVGISVIDHRPKELSYLYLEKV
FVSYSTGYDCGTTSRFKLILGGLQIDNMLPLSLMPVLLAPEQMGDVHHPVFKMTITMHNE
DTDGIKVFPYVYLRVTEKPWRLNIHEPIIWAFVDLYNNLQLDRIPKSSNVGQVDPEIRID
LVDVSEVRLKVSLETAPAERPHGILGVWSPILSAVGNALKIQVHLRRVMHRDRFMRQSSI
IPAISNRIWRDLIHNPLHLIFSLDVLGMTSSTLASLSKGFAELSTDGQFLQLRSKQVWSR
RITGVSDGIIQGTEALAQGVAFGVSGVVTKPVESARQNGLLGLAHGLGRAFLGFIVQPVS
GALDFFSLTVDGIGASCSKCLEVLNNRTALERIRNPRAIHGDGVLREYCEKEAVGQMILY
LAEASRHFGCTEIFKEPAKFAWSDLYEEHFVVPYQRIVLVTNKRVMLLQCPHLDKMDKKP
SKIMWDVPWEELMALELAKAGCLMPSHLMLHLKNFRRSENFVRIIKCSVEEIEGREHQAV
RICSVVRKMWKAYQSDIKCLTLKVPSSQRFVYFSWNVTDGNETHTSSKAIINSRDLSSSS
SMSNERKFVKHTINFSKIWSSERESRGRCTLCRKQVSEDEGICSIWRPICPDGYISVGDI
AHVGSHPPNVAAIYRNSDRRFALPVGYDLVWRNCSDDYITPVSIWHPRAPEGFVSTGCIV
VAGFTEPEIDTVHCVVQSLAEETVFEEQKVWSAPDSYPWACHIYQVRSDALHFVALRQTN
EESDWKPMRVIDDPQTLIEVN
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgccatctggggatatgaagcctgtaaaagttcctgtctcaaaaaatatgttggattcg
catattagagaagaactttctcgaaaagggggaagaatggtgacagttgctataaaagac
gctcagtttccaggagttgcagggttggcttctcatcaatatactgtggccattcgtctt
acacaagaccaaagtgcctgtggtgaatcatttttgcatcagcaaagtgctcgcacgagt
ggcagtatctctaattattcatgttctgagcttgaagtggtcaattggagtgaagtattt
ttctttaaagttgattcaccggagttttatatgttggagttaatagtgactaacatggga
agaggtgatcctgttggattcttctcagcccctttaaatcagatagcagagagttctgat
cagtatgattatgttgatggcttgacctggatggacttatccccagcagaatctatgaga
atgactcaagaagacaagtctaagaagtgtggaaaaatccggttttctgtactcttgtca
ccccaacctgaaattgaagaaaataataaatcatttttccttggtgctagaaaatctgga
cttattcaaattagtcctacaatggagggtccttggaccacagtgaagctaaactatgct
acaccagctgcttgctggcgcttaggcaatgatgtaattgctagtgaagtaagtgtgaag
gatgggaataggtacatgaccattcggtctctagttgcaatatgtaacaacacagatttt
ttgttggatttgtgtcttatacctaaagctgataccacaacgcaagatatatatgttgga
ttgttaaaacctggagactcagtctctctccctctatcaggcttgacacaacatggattg
tatgtattaaaactacgacccgcgggtcttgatggccctgaagaatattcttggagttct
gtagttgctaactctcgtgaacagaagagttgtgatgaaatatgcgtatcaactctcgca
cgctctgaagatttgttatgctgcactcagatgaatggctcctcttctagagttccacat
ctattgtggttttgtgtaagcacacaagccgtggagattgcaaaagacattcattctgaa
cctattcaagattggacaatcttgcttaaatctccattgtcaatcaccaataatcttccc
cttgaatctgaatactctgttcttgagaggcaagccactggtcattttttagtctgcaat
agaggaatatttggtccaggcaaaaccgtaaatgtctacaatgctgacataaggaatcag
ctattcttttccctgcttccacaaagagggtggctaccaatacatgaagcagttattata
tctcatccccagggaattcaatcaaagacaatagaatttagaagttcagctacgggaagg
attgttcaagtaattcttgagcaaaactatgacaaggaccgacctttactggcaaagatt
attagaatttatgctccatactggtttgctattgctagatgtcccccacttacacttaag
cttctagatctgactgtgacaaagcagacacggaagattggtttcccctttcagtataaa
aagaataaggaaatattgcttgaggagataactgaagaggaaatatatgaaggccataca
attgcttcagctttgaacttcaaatttttgggcctctcagtgtcaattgctcattctggt
gatgggcaatatggacctgttaaagacctttctcctcttggcgacatggatggatcactg
gatctctatgcttatgctgctgatggaaaatgcatgcggcttttcatatctacaaaacct
tgtccctaccagtctgtacctaccaaggtaatttctgttcggccatttttcactttcaca
aacagacttggtgaagatatatatatcaaattgagcagtgacgatgaaccaaagaagctc
catacagttgattcaagagtatcctttctgtatcatgaatctggtggaagagaagaactc
caggtctgcctagaagatacagaatggtcatttccagttcaaattgtaaaagaggacaca
atcactttggttctgaggaggcataatggtacgcggagatttctgaggacagaaatacgg
ggatttgaagaaggttcacgtttcatagttgtatttcgccttggatcaaccaatggtcct
atcaggattgagaacagaacaactgataagaccattggtattcgccaatctgggtttggt
gacaaatcctggattcagttggaatctctttcaacaacaaatttttcttgggaagatcca
tatggtcaaaaagttattgatgctaagattgatagtggctttagttctcgaatttgcaaa
attgacatggaaagcattggattatcttctgaggtgcaaagggaactagggatgcagttc
catgttgtagaaactggtgacatcaaggttcttaagttcacaaatgattgcataccagca
agttcaggggaaggaaatagctccgttgtagcttctggaaacctgggaaattctcaactc
caaagtgtaacagagagtgatattacaactttagagcttatagttgaattgggagttgtt
ggaatttctgttattgatcacagacctaaagaactctcttacttgtacctggaaaaagtg
tttgtatcatactcaactgggtacgattgtggaacaacgagcaggttcaagctcatactg
ggtggtctgcagattgacaacatgcttcctttaagtttaatgccagtgctcttggcacct
gaacagatgggtgatgtgcatcatccagttttcaagatgacaattacaatgcacaatgag
gacacagacggcattaaagtcttcccttacgtatacttaagggtgactgagaaaccttgg
agactgaacattcacgaacctatcatttgggcttttgtggatttgtacaacaatcttcag
ttagatcgcatccctaaaagttctaatgtcggtcaagttgatccagagatacgcattgac
ctcgtagatgtttccgaagtacggttgaaggtgtctttggagacagcaccagctgaaaga
cctcatggaattctaggcgtatggagtcctatattatctgctgttggaaatgcattgaag
atccaggtccacttgaggagggtgatgcacagagacagattcatgcggcagagctctatt
attccagccattagtaaccgtatttggagagacctgatccacaatcctttacatttgatt
ttttcactagatgttcttggtatgactagttcaacattggcttctcttagcaaaggattt
gccgagctttcaactgatggtcagttcctgcagttacgttcaaaacaggtatggtcaagg
agaatcactggggtaagtgatgggatcattcaaggtacagaagccctagcacaaggtgtt
gctttcggagtatcaggagtggtgacgaaaccggtggagagtgccagacagaatggtctg
ctgggacttgcacatgggctcgggcgtgcatttctaggatttattgtacagccagtgagt
ggggctttggatttcttctcattgactgttgatggaattggtgcaagttgttccaaatgc
ttggaggttttgaataatcgaaccgccctggagaggatcagaaaccctcgagctatccat
ggagatggtgtacttagggagtattgtgagaaagaagctgttggtcagatgatactttat
cttgcagaggcaagccgtcatttcggttgtaccgaaatattcaaggaacctgcaaaattt
gcttggtctgatctttatgaagagcattttgttgttccctatcagcgaattgttttagta
accaataaaagagtgatgctattacagtgtccacatctagacaagatggataaaaagccc
tccaagataatgtgggatgtgccatgggaggagctcatggctctggaattggcaaaagca
ggctgccttatgccttctcacttgatgctgcatctaaagaattttaggaggtcagaaaat
tttgtacgcattattaaatgtagtgttgaagaaatagagggaagagaacaccaagctgtt
aggatctgttcagtcgtacgtaaaatgtggaaggcataccagtctgacatcaaatgcctg
actctgaaggtcccttcaagccaaagatttgtgtatttttcttggaatgtaactgatggg
aatgaaacccatacctcaagtaaagcaataattaattcaagagacctctcttcatccagt
tccatgtcaaatgaaagaaaatttgttaaacatactatcaacttctcaaagatatggagt
agtgaacgggaatccagaggtcgatgcacattgtgtagaaaacaggtctcagaagatgaa
ggtatatgtagcatttggagacctatttgtccagatggttacatctccgttggcgatata
gctcatgttggcagccatcctccgaatgttgctgctatttatcgtaacagtgatagacgg
tttgcacttccagtgggttatgatctggtatggaggaactgttcggatgattatataact
ccagtgtcaatttggcatccacgggctcctgagggatttgtctctactggatgtattgtt
gttgccggtttcacagagccagagattgatacagtacattgcgtggtgcaatcgcttgca
gaggaaactgtatttgaagagcaaaaggtttggtctgcaccagattcatacccatgggct
tgtcatatttaccaagtccgaagcgatgctcttcactttgttgcattgagacagactaat
gaagaatctgactggaagccaatgagggttattgatgatccccaaaccttgattgaggtc
aactga
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integrated database retrieval system
