Carica papaya (papaya): 110810898
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Entry
110810898 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03030
DNA replication
cpap03410
Base excision repair
cpap03420
Nucleotide excision repair
cpap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110810898
03410 Base excision repair
110810898
03420 Nucleotide excision repair
110810898
03440 Homologous recombination
110810898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpap03032
]
110810898
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110810898
Enzymes [BR:
cpap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110810898
DNA replication proteins [BR:
cpap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
110810898
DNA repair and recombination proteins [BR:
cpap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
110810898
NER (nucleotide excision repair)
GGR (global genome repair) factors
110810898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
110810898
NCBI-ProteinID:
XP_021892906
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MATGVSTTTQNYPFGKIFSSSSWLSRFRARSLFSSHRSFYVVAHSTPSHKRGVRKIQSSQ
CTDPTSKNSHTIHKPWGSYGLILVLSYQRMVPRTLNNHHEKLDEAVIQVSGNNKRQKIFG
TIASQPKICSPEKGWEQETTMMRKEKEEIQLALDKYMPCSGKGSDPISIYVDGTCTTNTK
APAPENVSGHQSAPFFEIKHKNNSNIDVKEPNYVEQKTYKDIIENIGSLGPFPRQMLGKG
QGTESNVNGKVGIYADPENSRSETSTASPDAKDESKIAKKEKDARQLIQEKLSSIYSTVH
VVDNISDAKEVVKMLTGQFRNLVHACDTEVSKIDVKQETPVNHGELICFSIYSGPKADFG
NGKSCIWVDVLDGGGRNLLNEFAPFFEDPSIKKVWHNYSFDNHILENYGIKMSGFHADTM
HMARLWDSSRRMEGGYSLEALTGDATVMSKTEMAGGTELIGKISMKTIFGKKKLKKDGSE
GKLITIAPVEELQREERISWISYSASDAINTLELYDSLKGKLSSISWNVNGNRCPGEHMF
NFYEKHWRPFGELLVRMEAEGMLVDRKYLAEVEKIAKAEQEIAANRFRSWASKYCPDANF
KVPNMTKWLKXGKKTAGKYRSIKLHGLDVKLDTDMYTASGWPSVSGDALKVLAGKVSAEY
DFIDDACDPPLNNSPETSELNTSSYGTAFKAFGEGKKGREACHAIASLCEVCSIDSLISN
FILPLQGTNVSGKNGHVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGN
SLIVADYGQLELRLLAHLANCKSMLDAFKAGGDFHSRTAMNMYPHICEAIRKEQVLLEWH
PQPGEEKPPVPLLKDAYASERRKAKMLNFSIAYGKTPIGLSRDWKVSVEEAQQTVDLWYK
ERQEVLKWQEARKEEARTKGQVFTLLGRTRRFPNGRMSRAQRRHIERAAINTPVQGSAAD
VAMCAMLEISKNAQLKELGWKLLLQVHDEVILEGPSESAEIAKDIVVECMSKPFDGENIL
RVGLSVDAKCAQNWYAAK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggtgtctccaccaccacccaaaactacccgtttggaaaaattttctcttct
tcctcatggctatctcgttttcgtgcccgctctttgttttcttctcacaggtctttctat
gtggtggctcattcaacgccatcccataaacgaggagtccgcaaaatacagagttcccaa
tgtactgatccaacttctaaaaattcacataccattcacaaaccctgggggtcttatggg
ttgatcctcgtactaagttaccaaaggatggtgccccgaactcttaacaaccatcatgag
aaattagatgaagcagttattcaagtttctggtaacaataagaggcaaaaaatttttggc
actattgcttcccaaccaaaaatttgtagtcctgaaaagggatgggagcaagaaacaaca
atgatgaggaaggagaaggaagaaattcagctagcactggataaatatatgccatgttca
gggaaggggtctgatccaattagcatatatgttgatggcacctgcaccacgaatacaaaa
gcaccagctcctgaaaatgtttctgggcatcagtctgctcccttctttgaaataaagcat
aaaaataacagtaatatagatgtgaaagaacctaattatgttgaacagaaaacatataag
gacataatagaaaatattggatctcttggtccttttcctagacagatgttgggcaaaggg
caaggaacagaatccaatgtcaatgggaaggtaggtatttatgcagatccagagaattct
aggagtgaaacatcaaccgcaagtcctgatgctaaagatgaaagtaaaattgctaagaag
gaaaaagatgcaagacagcttattcaggagaagctgagtagcatctatagtacagttcat
gttgttgataacatatctgatgcgaaggaagtagttaagatgttgaccgggcaattcaga
aatcttgtacatgcatgtgatactgaggtttccaaaattgatgttaagcaagaaacccct
gtcaaccatggagaactaatatgcttcagtatttattctggaccgaaagcagattttgga
aatgggaaatcctgcatctgggtagatgttcttgatggaggtggaagaaatcttttgaat
gaatttgctcctttctttgaagacccatccatcaagaaggtttggcataactacagcttt
gataaccacattcttgagaactatggaattaagatgtctggctttcatgctgacacaatg
cacatggcacggttatgggattcgtcaagacggatggaaggtgggtattcacttgaagca
ctaactggtgacgcaacagttatgtcaaaaactgaaatggctggcggaactgaattgatt
ggtaaaatatccatgaaaaccatttttggcaagaaaaagttaaaaaaagatggatctgaa
ggcaaactaatcactattgctcctgttgaggaactacagcgagaagaacgaatatcttgg
atatcatattctgcctcagatgcaataaacacattagagctttatgacagcttgaaggga
aaactttcatctatatcatggaatgttaatggaaatagatgtcctggagagcatatgttt
aacttctatgagaaacattggcgaccatttggtgagcttctagttagaatggaagctgag
gggatgctggtagatcggaaatatcttgctgaggtggagaagatagctaaagcagagcag
gagattgctgctaaccggtttcgaagttgggcatctaaatactgccctgatgccaatttc
aaagttcccaatatgaccaagtggttgaagnnaggcaagaaaacagccggaaaatatcga
agtatcaagctacatggtcttgatgttaagttagatactgacatgtatacggcttccggt
tggccctcagttagtggagatgctttgaaggtcttggctgggaaggtttctgctgaatat
gatttcatagatgatgcctgtgacccaccccttaacaattctcccgaaacaagtgaacta
aacacatcttcttatgggactgcttttaaagcatttggagagggcaagaaggggagggaa
gcttgccatgcaattgcttcattatgtgaagtttgctcaatcgattctttgatttcaaat
ttcatccttcctttgcagggaactaatgtgtcaggcaagaatgggcatgttcattgttca
ctgaatatcaacacagaaactgggcgcttatcagctaggagacccaatttgcagaatcag
ccagctttggagaaagaccggtacaagatccgtcaggcatttatagcttcacctggaaat
tctctcatcgttgctgattacggacagctggaactcaggcttcttgcacatctggctaat
tgtaagagtatgttggatgcctttaaagctggtggagatttccattcaaggacggcaatg
aatatgtatccacatatttgtgaagccatcagaaaagagcaagtgctccttgagtggcat
cctcaacctggtgaagagaaacccccggttccattattaaaggatgcatatgcttcagaa
agaagaaaagccaaaatgctgaacttttccattgcatatggaaaaacgcctatagggctt
tctcgtgattggaaggtttctgtggaagaagcacaacaaacagttgatctctggtataag
gaaagacaagaagtacttaaatggcaagaagctcgtaaggaagaagctcgaactaaagga
caagtttttacattgctgggacggactcgtcggtttccaaatggtcgtatgtcgcgagcc
caaaggcgtcacatcgaacgtgctgccatcaataccccagtgcagggaagtgccgctgat
gttgcaatgtgtgcaatgttagaaatatcaaagaatgctcaattgaaggaacttggatgg
aagctgcttttacaggttcatgatgaagtgatcttagaagggccaagtgagtcagctgag
attgccaaggacatagttgtggagtgcatgtctaaaccctttgacggagagaatattctt
agagttggcctatccgttgatgcaaaatgtgcacagaactggtatgctgccaagtag
DBGET
integrated database retrieval system
