Carica papaya (papaya): 110811155
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Entry
110811155 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110811155
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110811155
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110811155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
DExH14_plug
Helicase_C
ResIII
AAA_22
DEXQc_Suv3
T2SSE
Motif
Other DBs
NCBI-GeneID:
110811155
NCBI-ProteinID:
XP_021893252
LinkDB
All DBs
Position
Unknown
AA seq
2084 aa
AA seq
DB search
MLVQLPRLTNSLREPFDVDDAYLRRKNILQNQDKSRKHVNSLDESELARNIVHRWEEASI
EVREAYKHFVGAIVELIDKEVPSEEFHEVALTSYRLFSRLRDEDDIDRIVTEKKSEVQKL
IGHAVLDANLKKVASLAWGLSSLQPSDPKGALVPESFVNGGSDGLEFGADFVFKPPARFI
VDISLEDQELIDEEVNALSSSHHEGWYDKGDSIDYQPASDGGIFNLSWLRDACDRIVRES
NSQLSQDELAMAICRVLDSEKPGEEIAGDLLDLVGDSAFETVQDLISHRKDLVDAFRHGL
LVLKSDKASTTSQSRMPSYGTQVTVQTESERQIDKLRRKEEKRHRRGTDYGAENEISAAK
FSSLLQASERKNLLDDLIGSGEGSHSFAVTALPQGTVRKHYKGYEEVIIPPTPAAQMKPG
EKLVCLNLLCXVAFVSYYXHAVKIDVXPRDQKEKLQFQPLHVTRIELFPWLSLSKGSWNV
AYLKILLQIGQHFKDGFLHKNEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDM
QLSKSELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVA
RTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPETGLFFFDSSYRPVPLAQQYIGIS
EQNFSVRNELLNEICYKKVVDSLRQGHQAMVFVHSRKDTAKTAEKLVELARKHEDLELFR
TDNHPQFALTKREVVKSRNKDLVELFEMGIGVHHAGMLRADRGLTERLFSDGLLKVLVCT
ATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITS
HDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLN
PLAYGIGWDEIIADPTLGSKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFY
IQYSTVETYNEMLRRHMNDSEVIEMVAHSSEFENIVVREEEQNELEMLARTSCPLEIKGG
PSNKHGKISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRKGWCEMSLFM
LEYCKAVDRQIWPHQHPLRQFNKDLSAEIMRKLEERGVDLDRLQEMEEKDIGALIRYAPG
GRLVKQYLGYFPSIHLSATVSPITRTVLKIDLLITPDFIWKDRFHGAAQRWWILVEDSEN
DYIYHSELFTLTKRMARGEAQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTISFQNL
ALPEACTSHTELLDLKPLPVTSFGNGVYESLYNFSHFNPIQTQIFHVLYHTDNNVLLGAP
TGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMSDWRKRLVSLLGKEMVEMTGD
YTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIV
SRMRYISSQTERPVRFVGLSTALANASDLADWLGVGDIGLFNFKPSVRPVPLEVHIQGYP
GKYYCPRMNSMNKPAYAAISTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHSHQFLS
MPEADLQMVLSQVTDQNLRHTLQFGVGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLA
WGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKK
SFYKKFLYEPFPVESSLRDQLNDHINAEIVSGTISHKEDAVHYLTWTYLYRRLMVNPAYY
GLDNTEEEILSSYLSRLVQHTFEDLEDSGCIKINEESVEPTMLGTIASQYYLSYMTVSMF
GSNIGPDTPLEAFLHILSGACEFDELPVRHNEENYNKALSEKVRYMVDENRLDDPHVKAN
LLFQAYFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMIMQ
GMWFDQGXCLWMLPCMNTDLISLLSKRGIYTVQQLLDLPRGTLQSVIGNFPASRVYQSEK
QISEVPSVVSDSTAVKGCAAKSTTLLAFAPRFPKIKNEAWWLILGNTYTSELYALKRVSF
TDRLVTHMELPSGTTTFQGIKLILVSDCYIGFEQEHSIEELTGC
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgctggttcagctccctcgattgaccaactcattgagagagccgttcgacgtcgacgat
gcatatctccgccgcaaaaacatccttcaaaatcaagacaagtctcgcaaacatgtaaac
tcacttgatgaatcagagcttgcaaggaatatagttcatcggtgggaagaagcttctatt
gaagtgcgggaagcatacaagcactttgttggggctatagtggagttaattgacaaggaa
gtaccttctgaagagttccatgaggtggcacttacttcataccgtcttttttccaggcta
agagacgaggatgatattgatagaattgtcactgagaagaagtcagaagtgcaaaaactt
attggccatgcagttttagatgctaatctgaaaaaggttgcttctctagcatggggactt
tctagtttgcaacctagtgaccccaagggtgcacttgttccagagagctttgttaacggg
ggaagtgatggtttagaatttggtgctgactttgttttcaagccaccagcacgattcata
gttgatatttctctggaggatcaggaattaatagatgaggaagtcaatgcactatcttct
tctcatcatgaaggatggtatgataagggtgactcaatagattatcagcctgcttctgat
ggaggtattttcaatttaagttggttaagagatgcatgtgaccgtatcgttagagaaagt
aattcacagctttctcaagatgaattggcaatggctatatgtcgagtactcgattcagaa
aaaccaggggaagagattgctggtgatttgttagaccttgttggagatagtgcatttgaa
actgttcaagaccttatatcgcatcggaaggatcttgttgatgcatttcgtcatggattg
ttggtacttaaatctgacaaagcgtctacaacatcccaatcacggatgcctagttatggc
actcaggttactgtacaaacagaatctgaacggcaaattgacaagcttcgacgcaaggag
gaaaagcgacataggcgtggaactgactacggggcagagaatgaaatatcagctgccaaa
ttttcttctttacttcaagcgagtgagaggaaaaatctgctggacgatttgattggatct
ggtgagggatcccattcatttgcagttactgctcttccccaaggtactgtcaggaagcat
tataagggatatgaagaggtcattatcccaccaacaccagctgcgcaaatgaaacctggt
gaaaagttggtatgtcttaatttgttatgttaggtcgcttttgtgagctattactgacat
gctgttaaaattgatgtctaaccacgtgatcaaaaagaaaagctgcaatttcaaccgttg
catgtaactaggattgaattgtttccttggctctctttgagcaagggctcctggaacgta
gcttatctaaaaattcttttgcagattggacagcatttcaaggatggtttcttgcataag
aatgagtttaagatagtttatgttgcgccgatgaaggcattggctgcggaggttacatca
acatttagccatcgtttatctccattgaatatgactgtgagagaacttactggagacatg
caactctctaagagtgaacttgaggaaacccagatgatagttacaacacctgagaaatgg
gatgtcattactcgcaaaagcagtgacatgtcactgtcaatgcttgtgaagcttttgatt
attgatgaagtgcatcttctgaatgatgacagaggcccagtaattgaggcactagtagct
aggacacttcgtcaggtggagtcaacacagacaatgatacgaattgtaggcctctcagcc
actttacccaattatttggaggttgcacaatttctcagggtgaatccagagacaggcctc
ttcttctttgattctagctaccgtccggtgcctctggcacaacagtatattggaattagt
gaacagaacttttctgtgagaaatgagttgttaaatgagatatgctataaaaaggtagtg
gattcccttaggcaaggtcatcaggcaatggtatttgttcattctcgaaaggatactgct
aaaacagctgagaaattggttgaacttgctcgcaagcatgaggatctggagctttttagg
actgataaccatccacagtttgctttaaccaagagggaagtcgtaaagtctagaaataaa
gatcttgtcgaactgtttgaaatgggcattggtgttcatcatgctgggatgttgcgggcc
gatagagggcttactgaacgacttttctctgatggactcttgaaggtgcttgtttgtaca
gcaactcttgcttggggtgtgaatctgccggctcacactgttgtgattaagggaacccag
ttatatgatccgaaggctggtgggtggcgggaccttggcatgctggatgtcatgcagatc
tttggaagggctgggagacctcagtttgacaaaagtggcgaaggcatcataatcacttca
catgacaaactggcatattatctacgactcctaacaagtcaactccccatagaaagtcag
ttcattagctccttgaaagataatttaaatgcagaggtggccttgggtactgtgaccaat
gtgaaggaagcttgtgcttggcttggttatacctatctctttatcaggatgaggttaaat
cctttggcgtatggaattggttgggatgagataattgctgatccaactttgggttcaaag
caaagagctcttgtaactgatgctgcacgtgctctagacaaagccaaaatgatgcggttt
gatgagaaaagtggaaacttttactgtacagagttgggtcggattgcaagtcacttttat
attcaatattctactgttgaaacttacaatgaaatgttgagacggcatatgaatgacagt
gaggtaattgaaatggttgctcattcttctgaatttgaaaatattgttgttcgagaagag
gagcagaatgagcttgagatgctcgcacgcacgtcatgccctttagaaatcaagggtggt
ccgtcaaacaaacatgggaaaatttcaattcttattcagctgtatatatctcgcggatcc
attgataccttctcgttggtctctgatgctgcatatataagtgctagtttggcacgtatc
atgcgtgctctatttgaaatttgcttgcgcaaaggctggtgcgagatgtctttgttcatg
ttggagtactgcaaggctgtagatcgtcaaatttggccccatcagcatccccttagacaa
tttaacaaagacctttccgctgagataatgagaaagcttgaagaacggggggttgactta
gaccgcctgcaggagatggaggagaaagacattggagctctgattcgttatgcacccggg
ggaaggttggttaagcaatatttaggatatttcccttctatccatttgtcagctactgta
agtccaatcaccaggactgttttgaagatagatttacttataactccagacttcatatgg
aaggatcgtttccacggtgctgcacagcgttggtggattttagttgaggattctgagaat
gattacatttatcactcggagctttttacactgaccaagaggatggctagaggggaagct
cagaagctttctttcactgtaccaatatttgaaccacatcctccacagtactatattcgg
gctgtttctgattcttggttgcatgcagaggctttttacaccatttctttccagaacctg
gcactaccagaggcttgcacttcgcacacagaacttctagatctaaagcctcttcctgtg
acttcattcggcaatggtgtttatgaatccttgtacaacttctcccatttcaatcctata
caaactcagatttttcatgtcctgtatcacacagacaataatgtcctgttaggagctcca
actggaagtggtaaaactatatcagctgagctggctatgttacgtcttttcaatactcag
ccagacatgaaggttatttacatagcaccattaaaagctattgttcgggaaagaatgagt
gattggagaaaaagacttgtctctctgctgggaaaagagatggttgaaatgactggagat
tatactccagatttgatggctctcttgtcagcagatatcattatatctactccagagaag
tgggatggtattagccgtaactggcacagcagaagctatgttaccaaggtcggcctcatg
attttggatgagattcacttactaggagctgatcgaggacccattcttgaggttattgtt
tcaaggatgagatatatatcatcacaaacagaacgtccagtacgatttgtaggtctttct
accgcattagcaaatgcaagtgatttggctgactggttgggtgttggagatataggactc
ttcaatttcaagccaagtgtaaggcctgtgccgcttgaagttcatatccagggatatcca
ggaaaatattactgcccgaggatgaatagcatgaataagccagcatatgctgcaatatcc
acccattcacctacaaaaccagttctcatatttgtttcatcacgtcgtcaaacaaggctt
actgcattagacctaattcaatttgcagcttcagatgaacattcacatcagtttcttagc
atgccagaagcagacttgcagatggttctttcccaggtcactgatcagaacttaaggcac
accttgcaattcggcgttggcttgcatcatgctggcctgaatgataaagatcgatctcta
gttgaagaactctttgccaacaacaagattcaggtgttggtttgcacaagtacattggca
tggggtgtaaaccttccagctcatcttgttattataaagggaactgaatattatgacgga
aaaacaaaaagatatgttgatttcccaattaccgatatcttgcaaatgatgggtcgtgca
ggtcgcccacaatatgatcaacatgggaaagcagttattcttgttcatgaacccaagaaa
agcttctacaagaagtttctatatgaaccattcccagtcgagagtagtcttagagatcaa
ttaaatgatcatatcaatgcagaaattgtttctggcacaatctcccataaagaagatgca
gtccattatcttacctggacctacttataccgtagactgatggttaatccagcatactac
ggattagacaacacagaagaggaaattctgtcttcatacttgtctagattggtgcaacac
acatttgaggatctagaagacagtggatgcatcaaaataaatgaagagagtgttgagcct
acgatgctgggtacaatagcatcacagtattatcttagctacatgactgtgtcaatgttt
ggatcaaacattggcccagatacaccccttgaagcatttttacacattctatctggtgca
tgcgagtttgatgaacttcctgtccggcataatgaggaaaactacaataaagcattatct
gagaaagttagatatatggtggatgagaatcgccttgatgatcctcatgttaaagcaaat
ctcttatttcaggcatatttctctcagttagagttaccaatcagtgactatataacggat
ctgaagtcagtgttagatcaaagtattcgcatcatccaagcaatgatagatatatgtgct
aatagtggatggctttcgagctcaattacatgcatgcatcttttgcaaatgataatgcag
ggtatgtggtttgatcagggtnnctgcctgtggatgttgccatgcatgaatactgatctc
ataagcctgctaagcaaaagaggaatttacactgtgcagcaactattggatcttcctaga
ggaactttgcagtctgtgattggaaacttccctgcttcaagagtctatcagtcagaaaag
caaatctctgaagtaccatccgtagtttctgattctactgctgttaaaggttgtgcagcc
aaatccacaacattactggcttttgcccctcgatttccaaagataaaaaacgaagcatgg
tggttgattcttggcaatacctacacctctgaactatatgctttaaaaagagtttctttc
acagaccgcttagttacccacatggagctcccatctgggacaactactttccagggaata
aagctgattttagtttctgattgctatatcggtttcgagcaagaacactccatcgaggaa
cttactggatgttag
DBGET
integrated database retrieval system
