Carica papaya (papaya): 110811280
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Entry
110811280 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1-like
Organism
cpap
Carica papaya (papaya)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
110811280
NCBI-ProteinID:
XP_021893401
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All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVRP
SSGEPLRALIQDHIVSAALLTKKDTFLNREEFNQLLYSSGVSVVGLGSASGKPGKKVSIW
SSEGDMLPILPAIWKPKPLWTGKQVITAVLNHITKGCPPFTVEKAGKLPRDFFKSKSIEN
VMSKRKWNDKDKVMKKKQKSVYTLSKERECADENESEKLVDNEDKLLIYKNDFVRGVIDK
AQFADYGLVHTVQELYGSNTAGLFLSALSRLSTVFLQMRHGLTCGLDDLLIKKDKDDART
RQLEECDHIGEKVLCKALGIKAEAKIDPKELKSKIERTICSDGDAALTSLDRSIVNELNQ
CTSKGIMNELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVPRMV
SGKTLPCFHPWDWAPRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQR
CLIKNLESLKVSYDYTVRDADGSIIQFQYGEDGVDVHRTSFIAKFKELTANQDMILEACG
RGTTFDTSNHYITELPSALKKKAEKFVKELPLNDRVALNLVKQEELLKLLKSRFLSSLAQ
PGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASNDLKTPIMTC
PLREGRTKEDANRLADRLRKIAVADIIERMEVSVVPFAIQDNQICSIHKLKMKLYKPEHY
PEYTDISVEDWEDTLQISYLRELEDAIQNHLVLLSRISGIKNFYARTHDQRASNETDEDF
SASESRRVEDDDDSGDDDVQDVEDLGXDAQKRKKQIPDEMDYEDGSEEEINEESLMLELK
ATILTLRTRMRLKLARMISSSYGMVRVRSLKVQXNHQRMMPLKVNCLKNPPKSKSRAEKT
KSETKRTKKVKAKFFKKETDRAVFIEAKGLEFEVHFKFVNEPHILLAQIAQKTAKKVYIQ
NSGRIERCQVGDCSDGQVIYYGKDPKDRKDIKTEDKKSIPALNAAGIDLVSFWQLQDHLD
VRYIYCNSVHAMLNTYGVEAARETIIREINHVFKSYGISVNIRHLTLIADYMTHTGGYRP
MSRLGGIADSTSPFAKMSFETASKFILHASQYGEADNLETPSARICLGLPVKMGTGCFDL
MQKLEV
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgtggttcgtgttttaaagggggaaaagacaatacgtatgcactatgcaaat
tgcagcacatataatgctgattttgatggcgacgaaatgaatgttcatttcccacaagat
gaaatttctcgtgctgaggcctataacattgttaatgcaaataatcagtatgtcaggcct
tccagtggtgaaccacttagagcgttaattcaggatcatatcgtaagtgctgctctcctg
actaagaaggacactttcttaaatcgagaagaatttaatcagcttttgtacagctcaggt
gtgtctgttgttggattaggttctgcttctggaaaacctggcaagaaagtttctatatgg
agctcagaaggagacatgcttcctattcttcctgcaatctggaagccaaagcctctgtgg
acaggaaagcaggttattactgctgtgctaaatcacataactaaagggtgcccgccattc
actgttgagaaagctgggaaacttccacgggactttttcaaaagtaaatcaattgaaaat
gtgatgagcaagagaaaatggaatgacaaagataaagtgatgaaaaagaaacagaaatct
gtgtatacactcagcaaggaaagagagtgtgcagacgaaaatgaatcagagaagttagtg
gataatgaagataagctgttaatctataaaaacgattttgtgcgaggtgtgattgataag
gctcagtttgctgattatggtctggttcatacggtacaagagctctatggctcaaatact
gcaggactttttctctctgcattgagtcgtctgtccactgttttcctgcagatgcggcat
ggactcacttgtggattagatgatcttttgataaagaaagataaggacgatgcaagaaca
aggcaactagaagagtgtgatcatattggtgagaaagtactttgtaaagctcttggaatt
aaagctgaagctaaaatagacccaaaggaattaaaatcaaaaattgaaagaactatatgt
agtgatggcgatgctgccttgacatccttggataggagcattgtgaatgaactgaatcaa
tgtacaagcaagggtattatgaatgagttgttatctgaggggttgttgaagcccactgga
aagaactggatatctcttatgactacatcaggggctaaaggtagtaaggttaatttccaa
caaatatcttcacatttgggacagcaagaattggaaggaaagcgagtccctcgaatggtt
tctggaaagacattaccctgcttccatccttgggattgggccccaagagctggggggttt
attagtgatcgctttcttactggtcttcgtcctcaagaatattatttccattgcatggct
gggcgtgaagggttagttgacactgctgtcaaaacatcccgcagtggatacctacaaaga
tgcttaataaaaaatcttgagagcctgaaggtgagttatgattatacagtccgtgatgct
gatggttcgataattcaattccaatatggagaagatggtgtggatgttcatcggacaagc
tttattgcaaagttcaaagaactgacagctaatcaagatatgatcctcgaagcatgtggt
cgggggacgacctttgatacttcgaatcattatataacggaattgccctctgctcttaag
aagaaagctgagaaatttgtgaaggaactccccttaaatgaccgagttgctctgaattta
gtcaaacaagaggaactcttgaagttattgaagtccagattcctctcaagtcttgcccag
ccaggggagccagttggtgtacttgctgcccagtctgtaggggaaccttcgacgcaaatg
acgttgaacactttccatcttgctggacgaggtgaaatgaatgtcacactgggaattcct
cgcctacaggaaatcttgatgactgcttcgaatgatctcaaaactccaataatgacatgc
cctttgcgagaggggagaacaaaggaggacgcaaaccgtcttgctgatagattgagaaaa
attgcggtagcagacataatagagaggatggaagtatctgttgtaccttttgccattcaa
gacaaccaaatatgcagtattcataagcttaagatgaaactgtacaaacctgaacactat
ccagagtacacagatatttcagttgaagactgggaagataccttgcagatttcgtacttg
agggagctggaggatgccatacaaaatcatctggttttgctctctagaatcagtggtata
aagaatttttatgcccggactcacgaccaaagggcttcaaatgagactgatgaagatttt
tctgccagtgaatcacggcgtgtggaagatgatgatgattctggtgatgacgatgttcaa
gacgttgaggaccttggtncagatgcacaaaagcggaaaaaacaaattccagatgagatg
gactatgaagatggttctgaagaggaaattaatgaagaatctctcatgttagagttgaag
gcgacaattctgacattgagaacgaggatgagattgaaattagcaaggatgatatcatcg
agttacgggatggtaagggtgaggtctctaaaagttcagtaaaaccatcaaaggatgatg
cctttgaaagtcaactgtctgaaaaaccctcccaagtcaaagtcacgagctgaaaagacc
aaatcagaaaccaaaagaacaaagaaagtcaaagccaaatttttcaagaaggaaacagat
cgtgcagtttttatagaagccaagggattagagtttgaggtccattttaaatttgtcaac
gaacctcatattctgctagctcagattgctcagaagacagcaaagaaggtttacatacag
aactctggaagaattgagcgatgtcaagtgggcgattgcagtgatggtcaggtgatttac
tatggaaaagatccaaaggatagaaaagatatcaagaccgaagacaagaaatcaattccg
gcactgaatgcagccggaatagatttagtttccttctggcaattgcaagatcaccttgat
gtcaggtacatatattgcaacagcgtacatgctatgctaaatacatatggggtggaagcg
gctagagagaccatcatcagggagataaatcacgttttcaagtcttacgggatttctgtg
aatatccggcacctgacgctcattgctgactacatgacgcacacagggggttatcgtccc
atgagtagacttgggggcatagcagattctacatcaccatttgctaaaatgtcttttgag
accgcatccaagttcatcctccatgcatctcagtatggggaggcagacaacttggagact
ccttcagccagaatctgtctcgggttgccagtgaaaatgggcactggatgtttcgacttg
atgcaaaaattggaagtctaa
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