Carica papaya (papaya): 110811514
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Entry
110811514 CDS
T05151
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110811514
Spliceosome [BR:
cpap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110811514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
TPR_14
Suf
HAT_PRP39_N
TPR_19
TPR_12
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_MalT
TPR_2
TPR_10
Motif
Other DBs
NCBI-GeneID:
110811514
NCBI-ProteinID:
XP_021893729
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MASITASFRTSMNFIGKVNAAFGSVIICFSAYGCVSSFYFAYYFIDLLISLWKWFYSFKE
LAERTPLSELRTPEEAAAGAAAAGAAAAGAADGLSESGEKVNEGEAQPNATEQSPKPVSA
GLTEAEELEKYIALREEMYKKAKEFESKIIGFETAIRRPYFHVRPLNVAELENWHNFLDF
IEREGDLNKVVKLYERCIIACANYPEYWIRYVLCMEASGSMDLADNALARATQVFVKRQP
EIHLFAARFKEQNGDIAGARAAYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAFSLYEQ
AIAIEKGKEHSQTLPVLYAQYSRFVLLVSGDAEKARKILVEALDHVQLSKPLIEALIHFE
TIQSPPRRIDFLDSLVDKFILPNSDTANAASPAEKEELSSIFLEFLGLFGDVLSIKKAED
RHAKLFLPHRSMPEFKKRHADDCLVSDKTKMARSYAGVPSAQSLMGAYPNAPNQWAGGYG
LQSQTWPPVTQAQAQHWTPAYGQQAAYGAYSGYASTYPTPQAPTSVPQSAAYGAYPSTYP
VQQTYPQQSYAQLTASAATVTPTQQPGSAPQAYYGSYY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcctctatcactgcttcatttcggactagtatgaattttatcgggaaggtaaatgca
gcatttggaagtgtcatcatatgcttttctgcatatggatgtgtttcttcattttatttt
gcctattatttcattgatttattaataagtctctggaaatggttctacagttttaaggag
ctggctgaaagaacacctttgtcagagttacggacccctgaggaagctgctgctggtgct
gctgctgctggtgctgctgctgctggtgcagcagatggactttcagaatctggtgagaaa
gtaaatgaaggagaggctcaacctaatgctacagagcaatctcctaaacctgtaagtgct
ggtttaacagaagcagaggagttggagaagtatatcgcccttagagaagagatgtataag
aaagctaaagagttcgaatctaagatcattggttttgaaacagctatacggaggccctac
ttccatgtgcggcccctcaatgttgccgagcttgaaaattggcataattttctggatttt
atagagagagaaggtgacctcaacaaggtggtcaagttgtatgaaagatgcataattgca
tgtgcaaattatcctgaatactggattagatatgttttatgtatggaagctagtggtagt
atggatcttgcagataatgcccttgctcgtgcaacacaagtctttgtcaagagacaacca
gagattcacctttttgctgctcgattcaaagagcagaatggggacatagctggtgctcga
gctgcatatcaacttgtgcatacagaaatttcacctggtctccttgaagcaattatcaaa
catgcaaacatggaacaccgtctagggaaccttgaagatgccttctctttatatgagcag
gctattgcaattgagaaaggaaaagaacattcccaaactttaccagtgttgtatgctcag
tattctcgttttgttcttctggtttctggtgatgcagagaaagctaggaaaattcttgtt
gaagcgcttgatcatgtccaactctcaaaaccactcattgaggcattaatacattttgag
acaatacaatcaccacctaggcggatagactttttagactcattggttgataagttcata
ttgcccaactcagatactgccaatgctgcaagtcctgctgagaaggaggagctttctagc
atatttctggagttcttaggtctttttggagatgttctgtcgattaagaaagctgaggat
cggcatgccaagctctttttacctcatagaagcatgccagagttcaaaaagcgtcatgca
gatgattgtcttgtctcagataaaacaaagatggccagatcctatgctggtgttccgtct
gctcagtctttgatgggtgcttatccgaatgcaccaaaccagtgggcaggtggctatggt
ttgcagtcccaaacttggcctcctgttacgcaagcgcaggcacaacattggacacctgct
tatgggcaacaggctgcatatggtgcatatagtggttatgcaagcacttatcccactcct
caagcaccaacatccgtaccacaaagtgctgcttatggtgcttatccttctacatatcct
gttcagcagacatacccgcaacaaagttatgcgcaactaactgcatcagcagcaacagta
acccctacgcagcaacctggttcagctcctcaggcatactatggatcttattactga
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