Carica papaya (papaya): 110811538
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Entry
110811538 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110811538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpap04131
]
110811538
Membrane trafficking [BR:
cpap04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110811538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
Clathrin
zf-HC5HC2H
TPR_MalT
DUF2175
DUF2247
Motif
Other DBs
NCBI-GeneID:
110811538
NCBI-ProteinID:
XP_021893758
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MEHFLASQVDITYVLSLYPSILLPKTTVIPELEKLVDISWDGAPLSRGSSGMSDDMESSS
PQNLLEFDENAVLESKKMSHNTLMALIKYLQNKRYSIIEKATAEGTEEVVLDAVGDNFKS
YDSTRFKKSNKGRGTIPINSGAREMASILDSALLQALLLTGQSSAALELLKGLNYCDIKI
CEEILQKGNHYAALLELYKCNSMHREALKLLHELVEESKSSQSQTEIIQKFSPESIIEYL
KPLCGTDPMLVLEYSMLVLESCPTQTIELFLSGNVPADLVNSYLKQHAPNMQGRYLELML
ALNENGISGNLQNEMVQIYLLEVLEWHGELSAQQKWDEKAYSPTRKKLLSALESISGYNP
EALLKHLPADALFEERAILLGKMNQHELALSIYVHKLHLPELALAYCDRVYESIAHQPSX
KFSGNIYLTLLQIYLNPKKTTKNFEKRITNLVSSQSTSSQKSISGSAFRGKGGRSSRKIA
AIEGAEDMRISHSSTDSSRSDGDAEESSEEGSSTFMLDEVLDLLSRRWDKINGAQALKLL
PRETKLQNLLPFLGPLLRKSSEAYRNLSVIKSLRHSENLQVKDELYNQRKLVVKISSDSM
CSLCNKKIGTSVFAVYPNGKTLVHFVCFRXSQSMKAVGKGRVGKSSPLMKLRS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaacatttcctagcatctcaagtagatatcacctatgtgctttccttatacccttct
attcttcttcccaaaacaactgtgattcctgaactagagaaactggttgacatttcttgg
gatggtgcacctctctcaagaggttcatctggcatgtcagatgatatggaatcctcatca
ccacaaaacctgctagagttcgatgagaatgcagtccttgagtcaaagaagatgagtcac
aatactctcatggctctcattaaatacttgcagaataagagatacagtataattgaaaag
gctaccgctgaaggaacggaggaggttgttttggatgctgttggagataattttaaatca
tatgattcaacaaggtttaagaagtcaaataaggggcgaggcaccatccccattaactca
ggcgctagggagatggcatccatcctagattcagccctactccaagcgctacttcttact
ggacagtcttcagcagctttagaattattgaagggccttaactactgtgatataaaaata
tgtgaggagattcttcagaaaggtaatcattatgctgctttgttggaactctataaatgc
aattcaatgcaccgtgaagcactcaaacttctacatgaacttgtggaagaatcaaaatca
agccagtcacaaactgaaataattcaaaagttcagccctgagtcaattattgaatatctc
aagcctctctgtgggactgatccaatgcttgttctggagtactcaatgcttgttcttgaa
agctgtccaactcaaaccattgagctttttctatctggaaatgttccagcagacttggtg
aattcttatttgaagcagcatgctccaaatatgcagggcagatatttggaacttatgcta
gcactgaatgaaaatggaatctcgggaaacctgcaaaatgaaatggtgcaaatttatctt
ttggaagtacttgaatggcatggtgagttaagtgctcaacagaaatgggatgagaaagct
tattccccaacaaggaaaaaactcctgtctgctttagagagtatctctggatataaccct
gaggctctgttgaaacatcttccagcagatgcactgtttgaagagcgggcaattctgttg
ggaaaaatgaaccaacatgaacttgccttgtctatatatgttcacaagcttcatctacct
gaactagcacttgcatattgtgatcgggtatatgaatcgatagctcatcagccatctngt
aaattttctggcaacatataccttactcttttgcaaatctatctgaatcctaagaagaca
accaagaactttgaaaagcggattacaaatctggtatcatctcaaagtacaagtagccaa
aaaagtatctcaggatccgcatttagaggtaaaggaggtcgttcatccaggaaaattgct
gcaatagagggtgcagaagacatgcgaatcagccacagtagcactgatagtagcaggagt
gatggtgatgctgaagaatcaagtgaggaaggaagctctacttttatgttagatgaagta
cttgatctgttgagccgaaggtgggataaaatcaatggagctcaggctctcaagctctta
cctagagaaactaaattacagaacttgcttccatttcttggacctcttttgagaaaatcc
agtgaagcatacaggaatctctcagtgatcaagagtttgaggcatagtgaaaatctgcag
gtgaaagatgaactctataaccaaaggaagttggtggtgaagataagcagcgatagtatg
tgctctctttgtaacaagaaaatagggacaagtgtgtttgctgtctatcccaatggcaaa
acactggttcactttgtttgcttcagangttcccaaagcatgaaagctgtgggtaaaggt
agagttggtaaaagttcaccgctgatgaagctacgatcttga
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