KEGG   Carica papaya (papaya): 110811558
Entry
110811558         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110811558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110811558
Spliceosome [BR:cpap03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110811558
 Complex B
    110811558
 Complex C
   U2 SnRNP specific factors
    110811558
SSDB
Motif
Pfam: SF3A2 CactinC_cactus
Other DBs
NCBI-GeneID: 110811558
NCBI-ProteinID: XP_021893784
LinkDB
Position
Unknown
AA seq 347 aa
MDRDWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
HNNEGLXXXXXXXGTKNLRKIAGMPSKVGMSIMLFCGLKPNELYVXSTVKIGRPGYRVTK
QYDPETKQRSLLFQIEYPEIEDNTRPRHRVMSSYEQKVQPYDKRYQYLLFAAEPYEIIAF
KVPSTEIDKSTPKFFSHWDPDSKMFTLQVYFKTKPPEIGKPPSAPAANGTAAPGVPPRPL
PPPPQAPPPPLPQGLPAGAPSINPPRAPPPPAPASLPPPPPPMANGPRPMPPGGTPPAPP
PPPSGSGTMLNFTPGSQVGRPPSIPPPPQGFPGQGPRPPLPPPNMGQ
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggacagagattggggttcgaagcccggcagcggaggcgcagcctcggctcagaatgag
gccattgaccgtcgggagcggcttcggaggctggcccttgaaaccattgatctcgctaaa
gatccctatttcatgcgcaatcatcttgggagttacgagtgtaagctgtgtttgacactg
cataataacgaaggactacnnnnnnnnnnnnnnnnnnngggaactaagaatctgcgcaaa
attgctggtatgccctctaaagttggtatgtctataatgttattttgtggcctgaaacca
aatgaattatatgttntttctacagtaaaaattggcaggcctgggtaccgtgtaacaaag
cagtatgatcccgagacaaagcagaggtcacttctcttccagattgaatatcctgagata
gaagacaatactaggccaagacaccgtgttatgtcatcttatgagcagaaagtccaaccg
tatgacaagagataccagtatcttctgtttgcagcagaaccgtatgagattattgctttc
aaggttccaagcacagagatagataaatccactcccaagttcttctcacattgggatcca
gattccaaaatgttcacgctgcaggtatatttcaagacaaagccaccagagattggcaaa
cccccatctgctcctgcagcaaatggcacagcagcaccaggtgttcctccaagaccttta
cctccacctccccaagccccaccaccacctctaccacaaggacttccagcaggtgctcca
tcaataaatcctcctcgagccccaccacctccggcacctgcatcattgccacctcctccg
cctccaatggcaaatggccctaggcctatgcctcctggtggaactccacctgcaccaccc
ccacctccaagtggcagtggcacaatgttgaacttcactcctggctctcaggtgggtaga
cctccttcaatccctcctcctcctcaaggttttccaggccagggtccacgacctcctctt
cccccgcctaatatggggcagtag

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