Carica papaya (papaya): 110811642
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Entry
110811642 CDS
T05151
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110811642
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110811642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
110811642
NCBI-ProteinID:
XP_021893885
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MESELVELFEAAKKAADAAALDGVSRNGPEISRCIDALNRLKIFPVSYNVLVATQVGKKL
RSLTKHPADKIQTVATDLLEMWKKVIIEETTRNKKSGTSNNIPSAKTQAAKVENVKVERV
QKEVPVKVEKVSNAQPVKVEKAYKGDSTRATKFEKKEAEVDAVMGENTRKEERHASIKRP
SQAPNAPPKLTSLIKCNDVLRDKVRELLVEALSKVANEADDDIREEVNASDPIRVAVAVE
SVMFEKMGRSNGAQKYKYRSIMFNIKDPNNPDLRRKVLLGEIKPERLISMTAEEMASDQR
QRENNQIKEKALFDCERGGAPKATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVN
CNNHWKFC
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgagttggtggaattgtttgaagcggcaaagaaggcggcagatgcggcggcc
cttgacggagtatctcgcaatggacctgagatatcgcgatgcatcgatgctttgaatcga
ctcaagatatttcctgtatcttacaatgttctcgtcgccactcaggttggaaaaaagctt
cggtctctcacaaaacatcctgcagacaagatacaaactgttgctactgacttgcttgag
atgtggaagaaagtaatcattgaagagacaaccagaaataagaaaagtggaactagtaat
aatataccgtctgcaaaaactcaggcagcaaaggtggagaatgtcaaagttgagagagtt
caaaaagaagtgccagtgaaggttgaaaaggtttcaaatgctcagccagtcaaagttgag
aaagcttacaagggtgattcaacaagagctactaagtttgagaaaaaagaagcagaagtg
gatgctgtcatgggtgagaatacccgcaaagaggaaagacatgcatctataaagagacca
tctcaggcacctaatgctcccccgaagctgacgtcattgatcaaatgtaatgatgtttta
cgtgacaaagttcgggaactccttgtggaggccctgtccaaagttgctaatgaggctgat
gatgacattagagaggaagtaaatgcaagtgatcctatccgggttgctgttgctgtagaa
tctgtaatgtttgaaaagatgggtcggtcaaatggtgctcagaagtacaaatacaggtct
ataatgttcaatatcaaggacccaaacaacccagatttgaggagaaaagttcttctagga
gagatcaagccagagaggcttatcagtatgaccgctgaagaaatggcaagtgatcagagg
cagcgggagaataaccaaatcaaagagaaagctttgtttgactgtgagcgtggtggtgca
ccaaaggcaacaacagatcaatttaagtgtggtcggtgtggtcagcggaaatgcacttac
tatcagatgcagacgaggagtgcagatgaacccatgacgacctatgtaacatgtgtaaac
tgcaacaatcactggaaattctgctaa
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