Carica papaya (papaya): 110811841
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Entry
110811841 CDS
T05151
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110811841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110811841
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110811841
Prokaryotic type
Archaeal type
TFB
110811841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
TXD17-like_Trx
TPR_NPHP3
Zn_ribbon_RRN7
RB_B
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
110811841
NCBI-ProteinID:
XP_021894119
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MMMIDSWCPDCNRPTEVVFDHSAGDRVCSECGLVLESHSIDETSEWRTFANESTDNDPVR
VGGPSNPLLADGGLSTVISKPNPSSPNFLPRWHTRASNPDRSLLQAFKVIATMSDRLGLV
ATIKDRANEIYKKVEDQKPLRGRNQDAILGACIYIACRQEDKPRTVKEICSVANGATKKE
IGRAKEYIAKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEELDI
RRSPISIAAAVIYMITQLSDEKKLLKDISLATGVAEGTIRNSYKDLYPHAATLIPSWYTK
EEDLRNLCSP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgattgactcgtggtgtccggactgtaaccgaccgaccgaggtggtgttcgac
cactcagcgggtgaccgagtctgctcagagtgcggactcgtcctcgagtcacactccatt
gacgagacctccgagtggcggactttcgccaacgagtccacagataacgatccagttcgc
gtgggcggcccgtcgaatccgcttttagctgacggcgggctctccaccgtcatctccaag
ccgaatccttcctctcccaacttcctcccccgttggcatactcgcgcttcaaatcctgac
cgttccctccttcaggcgttcaaggtcatcgccaccatgtccgacaggttgggccttgtt
gcaaccataaaggatcgagctaatgagatatataagaaagttgaagatcagaaaccactt
agaggacggaatcaggatgcaattctgggtgcttgcatctacattgcttgtcgacaagaa
gacaaaccacgcactgtaaaagaaatctgctctgttgccaatggggccacaaagaaggaa
attggccgtgcaaaagagtatattgcgaagcaattggaggtggaaatgggtcagtctatg
gagatgggaacaatacacgctggagattttttgaggcgtttttgttcccatctgggtatg
actaatcaagcagttaaggcagcccaagaagctgtgcagaaatctgaagagcttgatata
aggaggagtccaatatccatagcagcagctgtcatttacatgatcactcagctttcggac
gagaaaaaacttctgaaagatatttcattggccacaggggtggcagaaggcaccatcaga
aattcatacaaggatctctatccccatgccgcaacgctgataccaagctggtacaccaag
gaggaggacctccgaaacctctgcagtccctag
DBGET
integrated database retrieval system
