Carica papaya (papaya): 110811879
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Entry
110811879 CDS
T05151
Name
(RefSeq) RNA-binding protein Y14 isoform X1
KO
K12876
RNA-binding protein 8A
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
cpap03015
mRNA surveillance pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110811879
09122 Translation
03013 Nucleocytoplasmic transport
110811879
03015 mRNA surveillance pathway
110811879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110811879
03041 Spliceosome [BR:
cpap03041
]
110811879
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110811879
Spliceosome [BR:
cpap03041
]
Complex C
Other components
EJC/TREX
110811879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
110811879
NCBI-ProteinID:
XP_021894177
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MASADVEAVDFEPDEDDLMDEDGPADGNASPRAPLPKLKSAITGGASSSLAPKKTKGRGF
REEGDAERHNRLSSRDFDSLGSDGGPGPQRSIEGWIILVTGVQEEAQEDHLQNAFGEFGE
MKNLHLNLDRRTGFVKGYALIEYEKFEEAQNAISAMNGAELLTKTIYVDWAFSNGPSVGP
YKRKNMRFAPVRTLIWPFASFEES
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcggacgtggaggcggtggatttcgagcccgacgaggacgatttgatggac
gaggatggtccggctgacggaaatgcgtcgccgcgagccccgcttcccaagctaaagtct
gcaatcaccggcggtgcgtcttcttcactagcccccaagaagaccaagggccgtggattc
cgcgaggagggtgatgccgaacgccacaaccgcctctcttcccgagacttcgattccctc
ggctccgacggcggccctggcccacaacgatccattgaaggatggattattctggttact
ggtgtacaagaagaggcacaagaggatcatttgcagaatgcatttggtgagtttggggaa
atgaagaatctccatttaaatcttgatcgccgaactgggtttgttaagggctatgcgttg
attgagtatgaaaaatttgaggaagcacagaatgcaatatctgcaatgaatggagctgaa
ttacttacaaagacaatctacgtggactgggcctttagcaacggacccagtgttggaccc
tacaaaagaaagaacatgaggtttgctcctgtgcggactttgatctggccgttcgcatcg
ttcgaggagtcctag
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