Carica papaya (papaya): 110812755
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Entry
110812755 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110812755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110812755
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110812755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
WDR90_beta-prop_4th
VID27
NBCH_WD40
VPS8_N
Motif
Other DBs
NCBI-GeneID:
110812755
NCBI-ProteinID:
XP_021895290
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MWIFDTSDGDPRLLRFRSGHSAPPLCIRFYANGRHVLSAGHDRAFRLFSVIQDQQSRELS
QRHISKRAKKLRLKEEDLKLKPVIAFDCAEIRERDWCNVVTCHADTTEAYVWRLQHYVLG
EHILRPCPDIPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYVDISEKRSCAH
VGEVVGVACDSTNTLLISVGYHGDIKVWDFKGQEXKSRWEIGCTVVKIVYHRHNGLLATV
ADDLVIRLFDVVALRMVRIFEGHTDRITDLCFSDDGKWLLSSSMDGSLRIWDVILARQID
AIGVDVPVTALSLSSNMDILATTHVDQNGVYLWVNQSMFSGDSSIDSYGSGKKVVNVKLP
SVSSLVSSQADDIEKPVVNHMESENALSSQSFNFRIPDLVTLSLLPSSQWQSLINLDIIK
VRNKPIEPPKKPEKAPFFLPSLPLLSGEILFKPSESANEENDTKSNEVEESKEKFDVP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttttgacacaagtgatggtgatcctcgtcttttacgattccgcagtgggcat
agtgctcctccactttgcatcaggttctatgccaatgggcgacacgtactgtctgctggt
cacgatcgtgccttccgtcttttctcagtcatccaggatcagcaaagcagagagctttct
cagcgacatatatcaaaacgggcaaaaaaactcaggttgaaggaagaagacctgaaattg
aagcctgttattgcatttgactgtgctgaaatcagggagcgggattggtgcaatgttgtt
acatgccatgcagatactacagaggcatatgtatggagacttcagcactatgttcttgga
gagcatattctaagaccatgccctgacattccaactgctgtcaaggcctgcacgatcagt
gcttgtggcaattttgctgttcttgggacagcaggtggttggatcgagcggttcaatctt
caatctggaatcagccgaggaagttatgttgatatatccgaaaaacggagctgcgctcat
gttggagaagtagttggagttgcttgtgattctacaaatacactacttataagtgtaggg
tatcatggagatataaaggtctgggatttcaagggacaagaangtaaatctagatgggag
attggttgtactgtggttaaaattgtttatcatcgccataatggtcttttggctactgtg
gcagatgatttggtaatccgattgtttgatgttgtggcattaagaatggttcgtatattt
gaaggtcatacagacagaattacagatttgtgttttagtgacgatggaaaatggcttttg
tcttctagcatggatgggagtctaagaatttgggatgttatcttagcaagacaaatagat
gcaataggtgttgatgtgcctgtcacagcattatctctatcatcaaatatggatattttg
gcaactactcatgttgatcagaatggagtctacctgtgggttaatcagtcaatgttctct
ggggattcctctattgattcttatggaagtgggaagaaagttgtgaacgttaagttacca
tctgtttcttctttggtatcttctcaagctgatgatatcgagaagcctgttgtcaatcac
atggaatcagaaaatgctttgagtagtcaatctttcaatttcaggataccagatctggtt
accctttcattattgccaagtagtcaatggcagagcttgattaatttggatattataaag
gtccgcaataaacctattgagcctccaaagaaacctgaaaaggctcctttctttttgcct
tcgctgccgttgctttctggggaaatattatttaagcccagtgaatcagctaatgaagag
aatgacacaaaaagcaacgaagtggaagagagcaaagaaaaatttgatgtgcca
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