Carica papaya (papaya): 110812802
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Entry
110812802 CDS
T05151
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03030
DNA replication
cpap03410
Base excision repair
cpap03420
Nucleotide excision repair
cpap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110812802
03410 Base excision repair
110812802
03420 Nucleotide excision repair
110812802
03430 Mismatch repair
110812802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpap03032
]
110812802
03036 Chromosome and associated proteins [BR:
cpap03036
]
110812802
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110812802
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110812802
DNA Replication Termination Factors
ELG1-RFC complex
110812802
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110812802
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110812802
Check point factors
HRAD17(Rad24)-RFC complex
110812802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
AAA_22
Rad17
AAA_lid_RFC1
Mg_chelatase
AAA_16
Viral_helicase1
RuvB_N
nSTAND3
RCF1-5-like_lid
AAA_5
AAA_11
AAA_assoc_2
AAA_28
AAA_19
MeaB
DNAX_ATPase_lid
AAA_3
AAA_25
AAA_30
bpMoxR
RNA_helicase
IstB_IS21
ABC_tran
AAA_18
AAA_7
KTI12
NTPase_1
AAA_24
NPHP3_N
T2SSE
SLFN-g3_helicase
AAA_29
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
110812802
NCBI-ProteinID:
XP_021895345
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MASSSSSSTSIGYEMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG
KTTSILALAHELLGSTYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILD
EADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGR
LMVVVGAEKVPYAPEGLEAIIFTADGDMRQALNNLQATFSGFRFVSQENVFKVCDQPHPL
HVKNMVRNVIEGKFDDACYGLKQLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETG
FAHMRICDGVGSYLQLCGLLAKLALVRETAKAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcctcttcgtcctcaacgagtatcggctacgaaatgccatgggtggaaaag
tacaggcccagtaaagtcgctgatattgtagggaacgaagatgcagtctccaggcttcaa
gtcatcgctcgtgatggcaacatgcctaacctaatactttctggtcctccaggaacagga
aagactactagcattttagctcttgcacatgagcttctgggttcaacttatagagaggct
gtgttggaactgaatgcatccgatgacaggggaattgatgttgtaagaaacaaaattaag
atgtttgcacaaaagaaagtaacacttcctcccgggaggcataagatagtaatccttgat
gaagccgatagcatgacatctggagcacaacaagcattgaggcgcacaatggaaatatat
tcaaactctacccgttttgctttagcatgcaacacatcttctaagattattgagcccatt
cagagtagatgtgctcttgttcgattctcaagattatctgatcaagagattcttggacgt
ctcatggtggtggttggagcagaaaaggttccttatgctccagaaggtcttgaggccatt
attttcactgctgatggtgacatgaggcaagcactgaataatttgcaagcaacatttagt
ggttttcggtttgttagccaagaaaatgtcttcaaggtctgtgaccagcctcatcctctg
catgtgaaaaacatggttcgaaacgtaattgaagggaaatttgatgatgcttgttatggt
cttaagcaactctatgatatgggctactcgcccactgacatcatcacaaccctttttcgc
atcataaaaaattatgatatggcagaatacctaaaattggaatttttgaaggaaactggg
tttgcacatatgagaatttgtgatggagttggttcgtatcttcaactatgtggccttttg
gctaagcttgctctggttcgtgaaacagccaaggcagcatag
DBGET
integrated database retrieval system