KEGG   Carica papaya (papaya): 110812892
Entry
110812892         CDS       T05151                                 
Name
(RefSeq) RNA-binding protein 39
  KO
K13091  RNA-binding protein 23/39
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110812892
Spliceosome [BR:cpap03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    110812892
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 110812892
NCBI-ProteinID: XP_021895474
LinkDB
Position
Unknown
AA seq 592 aa
MEFDEYEYLEKAVEEQEDRDTSKKNKKESATEKSERSYRKRDGEREEDEEDERSRSKKSR
GDEDENGGRRDRDRDRHRSSREKDRERERDRDRDKDRDRESEREKDRDRDRERSSREREK
ERDRRERDKEKDKDRRERERDREKEREKERRDKERERERERERERERERRSSSRSRREEK
EREREREMKERERDIEMRESRRFKDKKETVEPEADPERDQRTVFAYQMPLKATERDVYEF
FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK
NLVQSNTTAGAGAAGPYGAVDRKLYVGNLHFNMTEIQLRQIFEPFGHVELVQLPLDLETG
QCKGFGFVQFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVGAQDTAAKSADFDDDDG
GGLSLNAQSRALLMAKLDRSGFATSIAGSLGAPVLNGSAVNQPAMSLPINGQAAFPAPML
PTSIIPGPASEPVGQPSECLLVKNMFDPATETEPDFDLDIKEDVEEECSKYGRVKHIYVD
KNSAGYVYLRFESVEASAAAQRAMHMRWFARRSISAIFLQPRDYEAKFKGGS
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggaattcgacgagtacgaatatctggagaaagctgtggaggagcaagaagatcgagac
acttcgaagaagaacaagaaggagagtgccaccgagaagagcgaaaggagttacagaaag
agagatggggagagagaggaagacgaggaagacgaacgaagcaggagcaagaaatctagg
ggtgacgaggacgagaatggagggaggagggatcgggatagggatcgtcatcgaagtagc
agagagaaagaccgcgaaagggagagggatagggatagggacaaggatagagatagggaa
tctgagagggagaaggatagagatagggatcgggaaaggagtagcagggagagagagaag
gagagggacagaagggagagggataaggagaaagataaggataggagggagagggagagg
gatagagagaaggagagggagaaggaaaggagagataaggagagagaaagggagagggag
agggagagggagagagagagggagagaagaagcagcagtcggtctagacgggaagagaag
gaacgtgagagagagagagaaatgaaagagagagagcgtgacatcgagatgagagaaagc
aggcgatttaaggacaagaaagaaacagtggagcctgaagctgatcctgagagggaccag
agaactgtttttgcttaccagatgcctctaaaggcgaccgagagagatgtttatgaattc
ttctctaaagcgggcaaggtgagggatgtgcgattgattatggacaggaattcaagacga
tcaaaaggagttgggtatattgaattttatgatgttatgtctgttccaatggcaatagct
ctgtctggccaactgctgcttggacaacctgtaatggttaaaccttctgaagctgaaaag
aatctagttcaatctaataccactgctggggcaggtgctgctggaccatatggagctgtt
gatagaaaactctatgttgggaatctacatttcaacatgacagaaattcaacttagacag
atttttgagccatttggtcacgtggagcttgttcaactgcctcttgacctcgagacagga
cagtgtaaaggttttgggtttgtccagtttgcacagcttgaacacgcgaaagcagcacaa
agtgctttaaatggaaagctggagattgctggtcgaaccatcaaggtgtcatctgttaca
gatcatgttggggcacaagatactgcagcaaagtctgcagattttgatgacgatgacggg
ggtggcttgtctttaaatgctcaatcaagagcactgcttatggcaaagctggatcgttcg
ggttttgccacgagcattgctggctcccttggagcgccagtgcttaatgggtcagctgta
aatcaaccagccatgagcttgcctattaatggacaagctgcatttcctgcaccaatgctt
cctacatccattatccctggtccagcctcagaacctgttggacagcctagtgagtgtcta
ctggtgaagaatatgtttgatcctgccactgagacggaaccagattttgaccttgacatt
aaagaggatgtggaagaagaatgttcaaagtatggccgtgtaaaacatatatatgtagac
aaaaatagtgctggatatgtgtatttacggtttgagtctgtggaagcatctgcggctgct
caacgtgcaatgcatatgagatggtttgcacgtaggtcgatctcagccatatttctgcaa
ccccgcgattatgaagccaagttcaagggtggcagttga

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