Carica papaya (papaya): 110812892
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Entry
110812892 CDS
T05151
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110812892
Spliceosome [BR:
cpap03041
]
Common components
Common spliceosomal components
General mRNP proteins
110812892
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110812892
NCBI-ProteinID:
XP_021895474
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MEFDEYEYLEKAVEEQEDRDTSKKNKKESATEKSERSYRKRDGEREEDEEDERSRSKKSR
GDEDENGGRRDRDRDRHRSSREKDRERERDRDRDKDRDRESEREKDRDRDRERSSREREK
ERDRRERDKEKDKDRRERERDREKEREKERRDKERERERERERERERERRSSSRSRREEK
EREREREMKERERDIEMRESRRFKDKKETVEPEADPERDQRTVFAYQMPLKATERDVYEF
FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK
NLVQSNTTAGAGAAGPYGAVDRKLYVGNLHFNMTEIQLRQIFEPFGHVELVQLPLDLETG
QCKGFGFVQFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVGAQDTAAKSADFDDDDG
GGLSLNAQSRALLMAKLDRSGFATSIAGSLGAPVLNGSAVNQPAMSLPINGQAAFPAPML
PTSIIPGPASEPVGQPSECLLVKNMFDPATETEPDFDLDIKEDVEEECSKYGRVKHIYVD
KNSAGYVYLRFESVEASAAAQRAMHMRWFARRSISAIFLQPRDYEAKFKGGS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgacgagtacgaatatctggagaaagctgtggaggagcaagaagatcgagac
acttcgaagaagaacaagaaggagagtgccaccgagaagagcgaaaggagttacagaaag
agagatggggagagagaggaagacgaggaagacgaacgaagcaggagcaagaaatctagg
ggtgacgaggacgagaatggagggaggagggatcgggatagggatcgtcatcgaagtagc
agagagaaagaccgcgaaagggagagggatagggatagggacaaggatagagatagggaa
tctgagagggagaaggatagagatagggatcgggaaaggagtagcagggagagagagaag
gagagggacagaagggagagggataaggagaaagataaggataggagggagagggagagg
gatagagagaaggagagggagaaggaaaggagagataaggagagagaaagggagagggag
agggagagggagagagagagggagagaagaagcagcagtcggtctagacgggaagagaag
gaacgtgagagagagagagaaatgaaagagagagagcgtgacatcgagatgagagaaagc
aggcgatttaaggacaagaaagaaacagtggagcctgaagctgatcctgagagggaccag
agaactgtttttgcttaccagatgcctctaaaggcgaccgagagagatgtttatgaattc
ttctctaaagcgggcaaggtgagggatgtgcgattgattatggacaggaattcaagacga
tcaaaaggagttgggtatattgaattttatgatgttatgtctgttccaatggcaatagct
ctgtctggccaactgctgcttggacaacctgtaatggttaaaccttctgaagctgaaaag
aatctagttcaatctaataccactgctggggcaggtgctgctggaccatatggagctgtt
gatagaaaactctatgttgggaatctacatttcaacatgacagaaattcaacttagacag
atttttgagccatttggtcacgtggagcttgttcaactgcctcttgacctcgagacagga
cagtgtaaaggttttgggtttgtccagtttgcacagcttgaacacgcgaaagcagcacaa
agtgctttaaatggaaagctggagattgctggtcgaaccatcaaggtgtcatctgttaca
gatcatgttggggcacaagatactgcagcaaagtctgcagattttgatgacgatgacggg
ggtggcttgtctttaaatgctcaatcaagagcactgcttatggcaaagctggatcgttcg
ggttttgccacgagcattgctggctcccttggagcgccagtgcttaatgggtcagctgta
aatcaaccagccatgagcttgcctattaatggacaagctgcatttcctgcaccaatgctt
cctacatccattatccctggtccagcctcagaacctgttggacagcctagtgagtgtcta
ctggtgaagaatatgtttgatcctgccactgagacggaaccagattttgaccttgacatt
aaagaggatgtggaagaagaatgttcaaagtatggccgtgtaaaacatatatatgtagac
aaaaatagtgctggatatgtgtatttacggtttgagtctgtggaagcatctgcggctgct
caacgtgcaatgcatatgagatggtttgcacgtaggtcgatctcagccatatttctgcaa
ccccgcgattatgaagccaagttcaagggtggcagttga
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