Carica papaya (papaya): 110813019
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Entry
110813019 CDS
T05151
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110813019
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110813019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
110813019
NCBI-ProteinID:
XP_021895696
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MASSFNAQILVDKLTKLNNSQASIETLSHWCIFHMNKAKQVVETWARQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDEFGRNAALRLISIWEERKVFGS
RGQILKEELVGRQAENSNRIGKHISSKLKQPVGNTLDKIVSGYQVLYGGQIDEDIILGKC
RNAVSCIEKVDKEIGVDVNSVRLHRPALMEEVQGQHAILRDCIEQLRALESSRKSLVSHL
REALQEQEFKLEQVRTQLQAAQSQSDLAGNICRQLLTGDNAQLVAEQSSKEALTSMASQT
FSQSDREQSAPVMYARQVSFPEKSTHLEDDPRKSAAAAVAAKLTASTSSAQMLSIVLSSL
ASEGVIGNPLNESSSKYPSEKRPKLDNDQSYIPTQHPQQPQIPPFSHPESLQHSMSTTTQ
QLPLNEAPPPPSSSPPPLPPLPPMPPYQVPQYMQTAGPVSGMPYNYTVSQQPASSLPGYP
TVGAPITSASPFTTPLQNSYQFQGSEGFYNQPSSMPMAPISRQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctagctctttcaatgcacagattttagtggacaagcttaccaagctcaataattct
caggcgagcatagaaaccttgtcacattggtgtattttccatatgaacaaagcaaagcaa
gttgtcgaaacatgggccaggcagtttcattgctctccacgtgagcagagattggccttt
ctataccttgccaatgacattctgcagaatagtaggcgaaagggttcagagtttgttggt
gaattctggaaggttcttccagatgctctccgtgacgtgattgaaaatggagatgaattt
ggaagaaatgctgctctacgattgattagtatatgggaagagcgaaaagtttttggttct
cgcggccaaattctcaaggaagaacttgtgggaaggcaggcagaaaacagtaacagaatt
gggaagcatataagcagtaaactgaagcagcctgttggaaatacattagacaaaatagtc
tcgggctatcaagttctttacggtgggcagatagatgaagacattattctgggaaaatgt
agaaatgctgttagctgcattgagaaagtagacaaggaaatcggggttgatgttaattca
gtgcgacttcatagacctgcgctcatggaggaagtccaggggcagcatgctatacttaga
gactgtattgaacaactaagggcacttgaatcatcaagaaaaagtcttgtgtctcacctg
agagaggctttgcaagagcaggaattcaaactggagcaagtccgtactcaacttcaggct
gcacaatcacaatcggatctagctggaaatatctgcagacagttactaactggtgacaat
gcacagttggtcgcagagcaaagctcaaaggaagctcttacctccatggcatctcaaact
tttagtcagtcagacagggagcagtcagcacctgtaatgtatgctcggcaggtgtctttt
cctgaaaaatctactcacttggaagatgacccccgtaaatctgcagctgctgcagttgca
gcaaagctaactgcatcaacatcctccgcccaaatgctatccattgtcctctcatccttg
gcatccgaaggtgtcattggcaacccattaaatgagtcatccagcaaatatccttcggaa
aagaggcctaagcttgacaacgaccagtcttacataccaacgcaacatccccaacaaccc
caaattcctccgttctcccatcctgagtccctccagcacagcatgtcgacaacaacccaa
caattacctctaaacgaagctccacctccaccatcatcctctcctcctccattgccacca
ttacctcctatgccaccatatcaagtgccgcagtacatgcagactgcaggaccagtaagt
ggtatgccatacaactacaccgtctcccaacaaccagcttcttctctgcctggttaccca
acagttggagctccaataacaagtgcctctccatttacaactcctctccaaaattcgtat
cagtttcaaggctctgaaggcttctataaccagccatcatccatgcctatggcaccgatt
agtcggcaatag
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