KEGG   Carica papaya (papaya): 110813059
Entry
110813059         CDS       T05151                                 
Name
(RefSeq) WD repeat-containing protein LWD1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110813059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpap04121]
    110813059
   03036 Chromosome and associated proteins [BR:cpap03036]
    110813059
Ubiquitin system [BR:cpap04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110813059
Chromosome and associated proteins [BR:cpap03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     110813059
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_1st Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd MIOS_WD40
Other DBs
NCBI-GeneID: 110813059
NCBI-ProteinID: XP_021895743
LinkDB
Position
Unknown
AA seq 346 aa
MGASSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
VQLDDSNGEIRCDPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRIADDQSKV
ELKTLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
IIMDSSKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggggccagcagcgatcccaatcaggacggctccgacgagcaacagaagcgatcggag
atctacacctacgaggcaccgtggcacatctacgccatgaactggagcgtccgtcgcgac
aagaagtatcgtctcgccatcgctagtctcctcgagcagtaccctaaccgcgtcgagatc
gttcaacttgacgattccaatggcgagatccgttgcgaccctaatttatctttcgagcac
ccttatcctcccaccaagaccatcttcatccctgacaaggagtgccagaagccggaccta
ctggccacctccagtgatttccttcgcgtttggcgcatcgccgacgatcaatccaaggtc
gagctcaagaccctcctgaatggtaacaagaacagcgagttctgcggtcccctcacctct
ttcgactggaacgaggctgagcccaagcgtatcggtacctctagcatcgacaccacctgc
accatttgggatatcgagagagaaaccgtcgacacccagctcatcgcccacgacaaggag
gtttacgacatcgcttggggaggtgtcggcgtctttgcctccgtctcagccgatggctcc
gtcagggttttcgatcttcgcgacaaggagcattccactatcatttacgagagctctgag
ccagacacccctttggttcgccttggatggaacaagcaggatcccaggtacatggctact
atcataatggatagttccaaggttgttgtcctcgacatccgtttccccactcttcctgta
gtggagttgcagagacaccaggccagcgtcaacgccattgcctgggcgccccacagttcc
tgccacatctgtaccgcgggggacgattcccaggctttgatatgggacctctcttccatg
ggtcagcccgtcgaaggcggactggatcctattttggcttatactgccggagccgagatt
gagcagcttcaatggtcgtcctcccaacctgactgggttgcaatcgccttctccaccaag
cttcagattctcagagtttga

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