Carica papaya (papaya): 110813381
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Entry
110813381 CDS
T05151
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110813381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110813381
03110 Chaperones and folding catalysts [BR:
cpap03110
]
110813381
03029 Mitochondrial biogenesis [BR:
cpap03029
]
110813381
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpap04147
]
110813381
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110813381
Messenger RNA biogenesis [BR:
cpap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110813381
Chaperones and folding catalysts [BR:
cpap03110
]
Heat shock proteins
HSP60 / Chaperonin
110813381
Mitochondrial biogenesis [BR:
cpap03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110813381
Exosome [BR:
cpap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110813381
Exosomal proteins of other body fluids (saliva and urine)
110813381
Exosomal proteins of breast cancer cells
110813381
Exosomal proteins of colorectal cancer cells
110813381
Exosomal proteins of bladder cancer cells
110813381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
110813381
NCBI-ProteinID:
XP_021896168
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MASANAFTSASIISAPRQRGLRRGNQKYSQRLNYRQSSSRFSVRANAKEIAFDQSSRSAL
QSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQKLVEELEKKARP
VKGRDVIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLICEFENARVLVTDQKISAIKDIIPLLEKTTQLSAPLLIIAEDVTGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSIEQL
GIARKVTIAKDSTTLIADAASKDELQARVAQLKKELSETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPTIKDKLEDAD
ERLGADIVQKALLAPASLIAQNAGVEGEVVVEKVKDAEWEIGYNAMTDKYENLVDAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKSKAKTPAAAPSQGLMV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctaatgcattcacatcagcttcgattatatccgctcctagacagagaggt
ttgaggagaggaaatcaaaagtacagccaaaggctgaattacaggcaatcaagcagccgg
ttttcggtgagagctaatgcaaaggaaattgcctttgaccagagctcaaggtctgcactt
cagtctggaattgataagcttgcagatgcagttggtctcactctagggcctagggggagg
aatgttgttttggatgaatttggaagtcctaaagtagttaatgatggagttacaattgca
cgagctatcgagctgcctgatgccatggaaaatgcaggtgcagcccttattagggaggtt
gctagtaaaactaatgactctgctggtgatggaacaacaactgcatcagttcttgcacgt
gaaataattaaactaggacttctgagtgtcacttccggtgcaaatcctgtttcattaaag
agggggattgataaaacagtgcaaaagttggttgaagaactagagaagaaagctcgaccc
gtgaaaggtcgtgatgttatcaaagctgttgcatccatctctgctggaaatgacgagctt
atcgggacaatgattgctgatgccattgacaaggttgggcctgatggtgttttgtctatt
gaatcatcatcctcgtttgagacaacagttgaggttgaggaaggaatggagattgacaga
ggctacatctcccctcaatttgttacaaaccccgagaaattgatttgtgaatttgagaat
gctagggtattggtaacagatcaaaaaatttcagcaataaaggatataattcccctacta
gaaaagaccactcagttgtcagctcctttactcataattgctgaggatgttactggagaa
gctctggctactcttgttgtcaacaagcttcggggtatccttaacgttgctgctataaaa
gctccaggtttcggtgagaggaggaaggctctgcttcaggacattgcaattttgactgga
gccgagttccaagctagtgatctgggcttgcttgtggagaacacctcaattgagcagctt
ggtattgccagaaaggtgaccattgccaaagactctaccacccttattgctgatgctgca
tcaaaggacgagttacaagccagggtagcgcaattaaagaaagagctctctgagactgat
tctgtgtatgactcagagaaacttgctgagagaattgcgaaattgtctggtggtgttgct
gttatcaaagtaggggctgctacggagacggagcttgaagaccgcaaactacgtattgag
gatgcaaaaaatgcaacatttgctgccattgaagaaggcattgtccctggtggtggtgcc
gccttggttcatctctcaacatatgttcccacaattaaggacaagcttgaagatgcagat
gaacgactaggtgctgacattgtgcagaaggcactgttagctccagcctcattaatagct
caaaatgctggagttgaaggagaggtggttgtagagaaggtgaaggatgcggagtgggaa
atcggttacaatgccatgacagacaaatatgagaacctggtggatgctggagttattgac
ccagcaaaggtaacaagatgtgcgctgcaaaatgcagcatcagttgcagggatggtcttg
accactcaggctattgttgtggagaagtcgaaggcgaagactcctgcagctgctccttca
caaggccttatggtgtga
DBGET
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