Carica papaya (papaya): 110813464
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Entry
110813464 CDS
T05151
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03030
DNA replication
cpap03420
Nucleotide excision repair
cpap03430
Mismatch repair
cpap03440
Homologous recombination
cpap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110813464
03420 Nucleotide excision repair
110813464
03430 Mismatch repair
110813464
03440 Homologous recombination
110813464
03460 Fanconi anemia pathway
110813464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpap03000
]
110813464
03032 DNA replication proteins [BR:
cpap03032
]
110813464
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110813464
Transcription factors [BR:
cpap03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110813464
DNA replication proteins [BR:
cpap03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110813464
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110813464
MMR (mismatch excision repair)
110813464
DSBR (double strand breaks repair)
HR (homologous recombination)
110813464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
110813464
NCBI-ProteinID:
XP_021896305
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MAETVTPDAISIILSNPSPDSSSGVPELVVQVLDLKSTGNRYTFNASDGKMKLKAIFPSN
LTSEIISGKIQNLGLIRILDYTLNDIPSKSEKYLIVTKCEVVSPALEMELKTEVKTEEAG
ILLKPKQETDVNNEITRETTGFNLKPKQEMVSRSVAQIVHEQRGNVAPAARMAITRRVHP
LVSLNPYQGNWTIKVRVTSKGNMRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKKF
FEKFQLGKVYFISRGTLKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPETKFNFVP
IDELGPYVNQKELVDIIGVVQSVSPTMSIRRKSDNEIIPKRDITVADETKKTVVVSLWNQ
LASGVGQELLDLADKSPVVAIKALKVGDFQGVSLSTIGKSTVLINPDTPDANKLRYWYES
EGKGTSMASVGTGMSPSSNSATRSVYSDRVTLSHLTSNPALGDGKPAFFSTRAFVSFIKA
DQAMWYRACKTCNKKVIEAIDSGYWCEGCQKSDKECNLRYITVLKVSDSSGEAWVSAFNE
EAEKIIGCPAEELDKLRYGEDGEYELKLKQATWKHHLFRVSIAQNEYNGEKRQRITLRTV
APVDFATESRLLLEEISKMK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacagtgaccccagatgctatatcgatcatcctttcaaatccatctccagat
tcatcatctggcgtccctgagctcgtcgttcaggttttggatctcaagtctactggaaat
cgatacacgttcaacgccagtgatggaaagatgaagctaaaagcaatattcccatcaaat
ttgacatctgagatcatctctgggaaaatacaaaaccttggtctcattcggattcttgat
tatactctaaacgatatcccaagtaaatcagagaagtatttaatcgtgacaaagtgcgag
gtggtttcccccgcacttgagatggaactgaaaactgaggtcaaaactgaagaagctggg
attttattgaagccaaagcaggaaactgatgtcaataatgaaatcacaagagaaaccact
gggttcaacctaaagccaaagcaagagatggtttctaggtctgtggctcaaatagtccat
gaacagcgtggaaatgtggctcctgctgctcgaatggccatcaccagaagagttcatcct
cttgtttccttgaacccttaccaagggaattggaccataaaagttcgggtgacaagcaaa
ggaaacatgcgtacttataggaatgctagaggagaagggtgtgtcttcaatgtcgagctg
acagatgaagatggcactcaaattcaggccacaatgttcaatgaggctgcaaagaaattc
tttgagaagttccagctagggaaggtctatttcatatcaaggggaactcttaaagttgcc
aacaagcagttcaagaccgtacagaatgattatgaaatgaccttgaatgagaattccgag
gtagaagaagcaagtaatgaagaaacttttattccagaaacaaaattcaattttgtgccc
attgatgagttgggcccctatgtcaatcagaaggaacttgttgatattattggggttgtt
caaagtgtttctcctacaatgagcatcagaaggaagagtgacaatgaaattattccaaag
cgtgacataactgttgcagatgagacgaagaagactgttgttgtttcactatggaatcag
cttgcaagtggtgttggtcaggaattgcttgacttggctgataaatctcctgtagtggcc
atcaaggctcttaaagttggagattttcaaggtgtatctttgtctacaataggcaaaagc
acagtgctgatcaatccagatacacctgacgctaacaagttgagatattggtacgagtct
gaaggtaaagggacctcaatggcctctgttggcactggcatgagtccttcatccaatagt
gccacgaggtctgtgtactctgatcgagttactctttctcatttgaccagcaatccagcc
ttgggcgacggcaagcctgcattttttagcaccagagcattcgtaagtttcattaaggct
gaccaggcaatgtggtaccgtgcttgtaaaacttgcaacaagaaagtgattgaggctatt
gattctgggtattggtgtgaagggtgccagaaaagtgataaagaatgcaatttgaggtat
ataacggtgttgaaagtatctgattcaagtggtgaagcatgggtttctgccttcaacgaa
gaagctgaaaagatcatcggatgccctgccgaggagcttgataaactgagatatggagaa
gatggtgaatacgagttgaaactgaaacaagctacatggaaacaccatctcttccgggtc
agcattgcgcagaacgagtacaatggtgagaaacggcaaaggataactcttaggacagtt
gcacctgttgattttgctactgaatctagacttttgcttgaagagatatctaaaatgaag
taa
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