Carica papaya (papaya): 110813521
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Entry
110813521 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110813521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110813521
03036 Chromosome and associated proteins [BR:
cpap03036
]
110813521
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110813521
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110813521
PBAF complex
110813521
GBAF(ncBAF) complex
110813521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
110813521
NCBI-ProteinID:
XP_021896386
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MPASPSFPSADNRGKWKRRRRGEPQIGRKSRHEEEELEDDEEENNDDDLDNSEDHQNGTA
APDPGPSETEVLAEGGVRISDFPAVVRRAVNRPHASVAAVVAAERAALSGETKGLQASLP
VLENVSYGQVQALSAVPADSPVFDQERSDGLGGVSSAFVISPPPVMEGRGVIKRFGNRVH
AVPMHSDWFSPHTVHRLERQVVPHFFSGKSSDCTPEKYMECRNYIVAKYMDNPERRLTVS
DCQGSVAGVNDEDLTRIVRFLDNWGIINYCAAAQGREPWNDGSYLKEDPAGEVNVPSAAL
KSIDSLIKFDKPKCRLKAADFYSSLSRRHDDVSDLDNRIRERLSENHCNYCSQALPIVYY
QSQKEVDILLCSDCFHEGRNVTGHSSIDFVKVDSTKDYGDLDGESWSDQETLLLLEAMEI
YNENWNDIADHVGSKSKAQCILHFLRLPMEDGLLENIEVPSKSKSLSSSNRDDCRGLDAN
SNGDLPESCVQRTESEVRLPFENSANPVMALVAFLASAVGPRVAAACAHASLAALSEGDG
LATSGQEGSGRSNRMNSGSINNREGSFHGEIPQKEENSMRHGSWSQNGAAIASLSAERVN
SAAKAGLSAAAMKAKLFADHEEREIQRLSANIVNNQLKRLELKLKQFAEVETLLMKECEQ
VEKARQRFAAERARMVAARFAPTGVSSQVSLPGVAPSMVNNNVGNNRQQVLSPSPTQPSI
SGYSNSQPVHPQMPFLSRQQVFPKGPRLPLNAIQPSSSSPSGMMFNAPGNXQPTLNHPML
RSMSGTSSGLG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttccttcccttcggcagataatcgtggcaaatggaagaggcgacgc
cgaggagaacctcaaatcggccggaagtccaggcatgaagaagaagaactagaggacgac
gaagaggaaaacaacgatgacgacctcgataactcggaggaccaccaaaatggaacggca
gcgcccgatccaggccccagcgagactgaggtgctcgctgagggtggggtccgcatctca
gatttccctgccgtggtccgccgtgccgtgaacagaccacacgcgtccgtcgctgcggtt
gtggcggccgagagggccgctttgtcgggggagactaaggggctgcaggcctcgctgcct
gttctggagaatgtctcgtacggccaagtccaggcattgtccgctgtgcctgcggattcc
ccggtgtttgatcaggagcggagtgatggcctcggcggcgtgagttcggctttcgttatc
tctccgcctcctgttatggaaggtcgaggcgtcattaagcggtttggcaatagagttcat
gcagtacctatgcattcagactggttttcaccacacacagtgcatcgattggagagacaa
gtggtgccacattttttctctggaaaatcttctgactgcacaccagagaaatatatggaa
tgtaggaactacattgttgccaaatacatggataatccagagaggagactcactgtgtct
gattgccagggatcagttgctggtgttaatgatgaagatttaacacggatagttcggttt
cttgataactggggaataatcaattactgtgcagctgcccaaggccgtgagccttggaat
gacggttcttacttaaaggaggatccagctggtgaggttaatgtgccatccgctgcttta
aagtctattgatagtttgatcaaatttgacaagcccaaatgtaggcttaaggcagctgac
ttttattcatcactttctcggcgtcatgatgatgtctctgacttggacaacagaattcga
gagcgtttatctgaaaaccattgcaactattgttcacaggccctgccaattgtgtattac
cagtcacaaaaagaggtggatatactcctgtgctctgattgtttccatgaggggaggaat
gttactggtcattcgagtattgattttgtaaaggtggattcaacaaaagactatggtgat
ctggatggggaaagttggagtgatcaagaaactttgctgcttcttgaggcaatggaaatt
tacaatgaaaattggaatgatattgcagaccatgtaggcagcaagtcaaaagcacaatgc
atcctccattttcttcgtctgcctatggaggatggcctgttggagaacattgaagttccc
agtaaatccaagtcattaagttcttccaatagagatgattgtagaggactagatgcaaac
tcaaatggggatctaccagagtcttgcgttcagaggactgagtctgaagtcaggcttcct
tttgaaaattctgcaaatcctgtcatggccttggttgcatttctggcctctgctgttgga
ccaagagttgctgcagcctgtgcccatgcatctctggcagcattgtctgagggtgatggc
ttagctacttctggacaggaaggatctggacgcagtaatagaatgaattctgggagcata
aataatagagaaggcagtttccatggagaaattccgcaaaaggaagagaactcaatgagg
catggttcatggagtcaaaatggggcagcaattgcttcattatctgcagagagagtcaat
tcagctgcaaaagcaggcctttctgctgccgcaatgaaagcaaaattgtttgcagatcat
gaagaacgtgaaattcaaaggctttctgctaatattgtaaataaccagttaaagagattg
gagctgaagttgaagcagtttgcagaagtggaaaccttgttaatgaaagaatgtgaacaa
gtagagaaagccaggcagaggtttgctgcagaaagggctcgtatggttgcagctcgattt
gcacctactggagttagctcgcaagtgagtctaccaggtgttgctccttccatggttaac
aacaatgttggcaacaacaggcaacaggtactctcaccctcaccgacgcagccaagcatt
tcaggatacagcaatagccaaccagtacatcctcagatgccatttttgtcacggcagcaa
gtgtttcctaaggggcctaggctgcctcttaacgccatacagccatcatcatcatctcct
tcgggtatgatgttcaatgcgccaggtaatncccagcctaccctcaatcatccaatgctg
aggtctatgtcgggcactagctctggtctaggttga
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