Carica papaya (papaya): 110813540
Help
Entry
110813540 CDS
T05151
Name
(RefSeq) N-glycosylase/DNA lyase OGG1 isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110813540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110813540
Enzymes [BR:
cpap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110813540
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110813540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
110813540
NCBI-ProteinID:
XP_021896416
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MKKPRLTPPIPPPLLPLIPQTPQKISTTHLKWTPLNLTRSDLSLPLTFPTGQTFRWKQTG
PLQFSGSIGPHLVSLKHHPKSRHVSYCLHYSTDASAAKLALLDFLNARISLSQIWAVFSA
ADPRFADLALHLQGARVLRQEPLECLIQFLCSSNNNIGRITKMVDFVSSLGLSLGVVGDF
KFHEFPSLERLSMVSEEELRQAGFGYRAKYIIGTVDALRSKPDGGIKWLLSLRKLDLQEV
IDALCTLPGVGPKVAACVALFSLDQHQAIPVDTHVWQIATKYLLPELAGARLTPKLSSCV
AEAFVSKYGKYAGWAQTLLFIAELPAQKMLLQSCPEAIKENKLAEGKDDETICGG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacccaggctgacgccaccgataccaccaccgttactcccgctgatccctcaa
acccctcaaaaaatctcaacaacacacctcaaatggacgcctctgaatctcacccggtcc
gatctctcattgcccctcactttccctaccggccagaccttccgctggaagcaaaccgga
cctctccagttcagcggttctatcggtccccatctggtctcccttaagcaccacccgaaa
agccgacacgtttcctactgcctccactacagcactgatgcctcggccgccaagctcgcg
ctcctcgatttcctcaacgcccgcatttctctttctcaaatttgggcagtcttctcggca
gcggacccgcggttcgctgatctggctctgcatttgcagggtgctcgggtgctgaggcag
gagccgctcgagtgcttgattcagttcttgtgttcctcaaataacaatatcgggaggata
actaaaatggtagatttcgtttcttctttaggactttctttaggagtcgttggtgatttc
aaatttcacgagttcccgtctttggaacgcttatcgatggtgtcagaggaagaacttaga
caagctggttttggttacagggccaaatatataattggtactgtagatgctttacgatca
aaacctgatggaggaataaaatggcttctgtctcttcgtaaattggacctgcaggaagtc
attgatgctttatgtactttacctggtgttggccccaaggtagcagcgtgcgtcgctctc
ttctctcttgatcaacaccaagccattcctgttgacacgcatgtgtggcagattgctaca
aaatacctcctccctgagcttgctggtgcccgccttacacccaagctttctagctgtgtg
gcagaggcatttgtgagcaagtatgggaagtatgctggctgggctcagaccttacttttc
attgctgaattacctgcacagaagatgctcctacaatcatgtcctgaagctatcaaagag
aataaacttgctgagggaaaggatgatgaaacaatttgcggtggctga
DBGET
integrated database retrieval system
