Carica papaya (papaya): 110813651
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Entry
110813651 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing protein 40C
KO
K12824
transcription elongation regulator 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110813651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110813651
Spliceosome [BR:
cpap03041
]
Complex A
U1 snRNP components
U1 related factors
110813651
Complex B
110813651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
110813651
NCBI-ProteinID:
XP_021896567
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MNESTPPQIGGIPCPPFLPHLAVYPGPYPLPAFGSSLPSGPVSDSQPVGVTSLGTADNRK
PAQDVGNKDGSAVGEQLDAWTAHKTESGIVYYYNALTRQSTYEKPPDFKGEPDKVPVQPT
PVSMECLSGSDWALVTTNDGKKYYFNSKTKISSWQVPNEVTDLRKKQGNEIFREHSLSVP
NVDPVTEKGSASTSLSTPAINTGGRDAIAIRTSGPPGSSSALDXVKKKLQDPGAPATSLP
APVSSVAASEVNGSKVVELAKGLQSENSKDKLKDTTGDGNMSDSSSDSEDADSGPTKEEC
IIQFKEMLKERGIAPFSKWEKELPKIVFDPRFKAIPSHSARRSIFEHYVKTRAEEKRKEK
RAAQKAAIEGFKQLLDEAFKDIDHNTDYQTFRMKWGGDPRFEALERKDREVLLNERVLPL
KRAAEQKAQAIREAAASTFKSMLRERVDINVNSRWSRVKDSLRNDLRYKSVGHEDREVLF
NEYISELKAIQAEANREAKAKREEQEKLKERERELRKRKEREEQEMERVRLKVRRKEAVS
SYKALLVETVKDPQASWTDSKPKLEKDPQGRATNPDLDPSDTEKLFREHITMLHERCVHD
FKIMLAEVITLEAAAQETEEGKTILNSWSTAKRLLKVDPRYSKIPRKERELFWRRYVEDM
SRRQKAAHDQKEEKHTNGKGRSSIDSGRLPSGSRRTHEQR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtcaactccacctcagataggtggcatcccttgcccaccttttttgccgcat
cttgctgtttatccaggaccttatcctttaccagcatttggttcttctcttccttctggt
cccgtatctgattctcaaccagttggtgttacttctttgggaactgcagataataggaaa
cctgctcaagatgttggcaataaggatggttctgctgtaggcgaacaattagatgcttgg
actgcccacaagactgaaagtggaattgtctactactataatgcgttgacaagacaatca
acatatgaaaaaccacctgattttaagggagagcctgataaggttcctgtgcagccaaca
ccagtttcaatggagtgtttgtctgggagtgattgggctttagtcaccacaaacgatggg
aaaaagtattatttcaatagtaagacgaagataagcagctggcaggtccccaacgaggtt
acggatttgagaaagaagcagggtaatgagatattcagagagcactcgttgtctgtgcca
aatgttgatccagtgactgaaaaaggatctgcttcgacaagtttgagtactcctgctatt
aatacaggtgggcgtgatgccatagctattagaacctcaggtccacctggatcttcgtca
gcattggatnttgtaaagaagaagttgcaggaccctggagctcctgcaacttccttgcct
gctccagtttcatcagtggcagcatcagaagtaaatggctcaaaagtagttgagctcgca
aaaggcttgcaaagtgaaaatagcaaagataagctaaaagatacaacaggagatggtaac
atgtctgattcttcttcagactctgaggatgcagacagtggaccaacaaaagaagagtgt
atcatccaatttaaggagatgcttaaggagcgaggaattgcaccattctcaaaatgggag
aaggaattgccaaagatagtttttgatcctcgctttaaggcaattccaagtcattctgct
cgaaggtcgatatttgaacattatgttaagacacgtgctgaggagaaacgcaaagaaaaa
cgggctgctcagaaggctgcaattgagggattcaagcagttactggatgaagcatttaag
gatattgatcacaacactgattatcagacttttagaatgaaatggggaggtgatcctcgt
tttgaggctttggaacgcaaggaccgggaagttttattgaatgagagggtccttccattg
aagagggctgctgagcaaaaggcccaagcgatacgtgaagctgctgcctctacatttaag
tccatgctacgggaaagggtggatataaatgtaaactcccgctggtccagggtaaaggac
agtctaaggaatgacctaagatataaatctgttgggcacgaagatagggaggttttattc
aatgagtacatatctgaactgaaagctattcaagcggaagcgaaccgagaggcaaaagcc
aaaagggaggagcaggagaaactaaaggaaagggagcgggaactgcggaaacgtaaagaa
cgagaagaacaagaaatggaaagagttagactgaaagttcgaagaaaggaggcagtatcg
tcttataaagctttgcttgtggaaactgtcaaagatcctcaggcatcttggacagattca
aagcctaaactggagaaggatcctcaaggacgtgcaaccaaccctgacttagatccgtct
gatacagagaagctctttcgtgaacatataacgatgctgcatgagcgatgtgtgcatgac
ttcaaaatcatgttagctgaagtcattactttggaagcggctgcccaggagacagaagag
ggcaaaacaatcctcaactcatggtcaacagctaaacgtcttctaaaggttgatcccagg
tatagtaagattccgagaaaagagagggaacttttttggcgccgatatgttgaggatatg
tcccgcaggcagaaagcagcacatgatcagaaagaagagaagcatacgaatgggaaagga
agaagctccattgactccgggagacttccttcgggatcaaggagaacccatgagcagagg
tag
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