Carica papaya (papaya): 110813896
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Entry
110813896 CDS
T05151
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110813896
03036 Chromosome and associated proteins [BR:
cpap03036
]
110813896
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110813896
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110813896
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110813896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
110813896
NCBI-ProteinID:
XP_021896863
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSVFLEILKCILCCEEDQHHGDNDDWRDPPRASRFFGTFAGNSFASRYHLLQSESMSRTQ
SYHSTNTISSPLLTSSKARPAASPGRLVQSRSVLGPSTTSSPSRLNTVERTNEVRQSSTT
SSSYTTYSPRSSMPPNSSSQTPSSSLPYVKPTKSFLNPSAPSHSELPSPSTKPLPSLKPT
LSRASSKSSNKDSYILVGASPTYMIPKNIIDLIKKDIVPGVLEHPLSPSTYSDYFSALLY
AEDYYIEKWCKFQLENVKLKLEVVSVYKRSGKNRQTSENKEKEKKIFVAFEVDSVPERRP
FLLSRDFVFAQPSGRKLEPFRGLVHRVVRSTTVLVEFGDDFHSQHHPTCKYDISFSFNRV
CLKRAHQAIAAASDPSFQSFIFPDSVSHKRIASSAPYILCNYKLDLDQKSTVHQILDFQG
SPPYLVEGPLCVTDSKLSQTGIVVQEVIFQLYKQNPKHHILVCAPINNTCDELMSSLKKK
IPESDMFRANAAFREIDGVPLDILPSCLYKGECFTCPSIQEFRKYRIIFSTFVSSFRLHH
EGITAGHFSHIFLVDASSATEPEVMVALANLATERTAVIVTGAPGNCSKWVRSEIARRNG
LKESYFERLCASYPYRTRNSSFISRLVNSRDNPSP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtttctagaaatcctgaaatgtattctttgttgtgaagaagatcagcatcat
ggtgacaatgatgattggagagatcctcccagggcgtctcgcttttttgggacttttgca
gggaatagctttgcttctagataccatttgttgcaatctgagtcaatgtcaaggacacaa
agttatcattctactaacacaatttcatctcctctccttacaagtagcaaggcaagaccc
gccgcatctccaggtcgattagttcagagcaggtcagttttaggtccaagcacgactagt
tccccctcacgtcttaacacagtggaaagaactaatgaagtgcgtcagagctcaacaact
tctagttcatataccacgtactcacctcggtcgtctatgccacctaattcttcatcacag
actccatcctcttctttgccatatgttaaacccacaaagtcttttttgaacccatcagca
ccatctcattctgagctcccttctccttcaactaagccccttccgtcgttgaaaccaact
ctatctcgtgcttcatctaaatcaagtaacaaggatagctacattttggttggagcatcg
ccaacttacatgattcctaagaatataatagacttgattaagaaggatattgtgcctgga
gttctggaacatccattgtctccatcaacatacagtgattatttttctgctctgctatat
gctgaagactactacattgagaaatggtgcaaattccagttggagaatgtgaaattgaag
ttagaagtagtatcagtctataagaggtcaggcaagaaccgacaaacatctgaaaataag
gaaaaggagaaaaagatatttgtagcgtttgaggttgattcagtccctgaaaggcgacca
tttctcttatcgagggattttgtctttgcacaaccttcaggcaggaaacttgagccattt
aggggtttggtacatcgtgtcgtgaggagcacaacagtattagttgaatttggagatgat
tttcattctcagcaccatccaacatgcaagtatgacattagcttctctttcaacagagtc
tgtctaaagagggctcatcaggccattgcagctgcatcagatccttcatttcagagcttc
attttccccgatagtgtttcccataagcgtatagctagttctgctccgtacattctatgc
aactataaacttgatcttgatcagaagtccacagttcatcagattttggacttccagggt
tcaccaccttatcttgtagagggtccactgtgtgtaacagattcaaagctttcacaaaca
ggaattgttgttcaagaggtgatatttcaactttacaaacagaatcccaagcatcatata
cttgtatgtgcgcctataaataacacttgtgatgaactaatgagtagcttgaagaagaaa
atccctgagtcagacatgtttcgagccaatgctgcattcagagagatcgatggggtacct
ctggacatcctgccctcgtgtctttacaaaggggaatgttttacttgtccttccatccag
gaattccggaagtaccggataatattttcaacatttgtgagtagctttcggctacatcac
gaaggaattactgctgggcatttcagtcatatcttcttggtggatgcctcatcagctact
gagccagaggtgatggtggccttggctaatttggccacagaaagaactgctgtcatagtt
actggtgcacctgggaattgttcaaaatgggtccgctctgaaattgcacgaagaaatgga
ttgaaagaatcatatttcgaaagactatgtgcaagctacccctacaggactcgcaattcg
agcttcatttctcgactggtaaacagtagggacaatccttctccttaa
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