Carica papaya (papaya): 110814034
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Entry
110814034 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110814034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110814034
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110814034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF3368
Motif
Other DBs
NCBI-GeneID:
110814034
NCBI-ProteinID:
XP_021897040
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MDVEATRHTCLKLEIPDNDPIFVKGTWLASSFHLSITDGRHAWLCDASEEEVRERALQWD
QPVAEYIELAERYLGFQQPGSVYRFSDAGDGNKRLSWTFEKEGTKLEWRWKCKPSPDSRK
ITSEILDFLMDANMRLSEEVVRKIQSNERLKVEAEKCLAQSEKFSNEKSEFESAIYAKFL
HVLNSKKAKLRELRDQLSKQDTTRKLPLEEEDTDETESYDSXKNNDRKRNEEAARNLTSI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaagcaacgagacatacatgccttaagctagaaatccccgataacgacccc
atcttcgtcaaaggcacgtggctcgcctctagcttccacctctccatcactgacggccgt
catgcttggctatgtgacgcgagtgaagaggaggtgagagaacgagccttgcagtgggac
caaccagtggctgaatatatagaattggcggagcggtacttaggatttcaacagcctggt
tcggtttacagattttctgatgctggtgatggcaataaaagactctcgtggacttttgag
aaggaagggaccaaacttgaatggcgatggaaatgtaagccatcacctgatagcaggaag
ataacatcagagattttggattttcttatggatgcaaacatgagactgagtgaagaagtt
gttagaaagattcaatcaaatgagagattaaaagtggaagctgagaaatgcttagcacag
agtgaaaagttcagcaatgagaaatcagaatttgagtctgcaatttatgcaaagtttctc
catgttttgaactcgaagaaagcaaaactcagagagctacgagatcagctttctaaacag
gatactaccaggaaattgcctctggaagaggaggacacagacgaaacagagagttatgac
agtnngaaaaacaatgacaggaaaaggaatgaagaagctgcaaggaatctaacgtccatt
tga
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