Carica papaya (papaya): 110814157
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Entry
110814157 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpap03036
]
110814157
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110814157
microRNA pathway
RISC loading complex
110814157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
PAZ
Dicer_PBD
ResIII
DND1_DSRM
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110814157
NCBI-ProteinID:
XP_021897215
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MTAQILLNILRHSIIKMEAIDLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPTVFGMT
ASPVNLKGVSSQVDCAMKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLW
SLHEQIKQMEVAVEEAAQSSSKRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLVQ
KLRAINYALAELGQWCAFKVAQSFLTALQNDERVSYQLDVKFQETYLSKVVSLLQCLLSE
GAASDKDMKAVDTENDTELGGNNLDDIEEGELPDTHAVSGGEHVDVIIGAAVADGKVTPK
VQSLIKILMKYQHTEDFRAIIFVERVVAALVLPKVFSELPSLSFIKCASLIGHNNSQEMR
TCQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG
SDYILMVERENLSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLLSVDVMPGTVYQV
ETTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGCPIEYSCRLQLPCNAP
FEKLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEVEKVDQNDEGDALP
GTARHREFYPEGVADILKGEWILSGRDCCDDSELHLYMYAVKCVDSGVSKDPFLTQVSDF
AVLFGNQLDAEVLSMSMDLFIARAMITKASLVFRGAICITERQLASLKNFHVRLMSIVLD
VDVEPSTTPWDPTKAYLFVPVVGDKSVDPFKEIDWDLVDEITRADAWTNPLQRARPDVYL
GTNERTLGGDRREYGFGKLRNGMAFGQKCHPTYGIRGAVAQFDVVKASGLIPNRNAFEMQ
KVDLSKGELMMADGLANVQDLVGKIVTAAHSGKRFYVDSIRYDMTAETSFPRKEGYLGPL
QYSSYADYYKQKYGVELLFKREPLIRGRGVSYCKNLLSPRFEHSEALECECEETLDKTYY
VFLPPELCFVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDIIDYPVHASKILEALTAA
SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKG
LQSYIQADRFAPSRWAAPGVLPIFDEDTKEDLFDQEKLLTEDKAGTNLHDDDYEDGEKED
GELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQVESDPEEIECAV
RPTTVPESILRSVDFDALEGALNIKFKDWGLLVEAITHASRPSSGISCYQRLEFVGDAVL
DHLITRHLFFMYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHLHLRHGSSALEKQIRDF
VKEVQGELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTRFTFAVRVNTADKG
WTDECIGEPMPSVKKAKDSAAVLLLELLNKWYS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgacagcccaaatacttttaaacattttgaggcacagcataattaaaatggaagccatt
gatctccttattctggatgagtgccatcatgctgttaagaaacatccatattctttagtg
atgtctgagttctatcacactaccccaaaggagaaaagaccaactgtttttggaatgacg
gcttcacctgttaacttaaagggtgtttcaagtcaagtcgactgtgcaatgaaaattcgt
aatcttgagagcaaactagattccatcgtttgtacaataaaagacaggaaggagctggaa
aagcatgtcccaatgccttcagaaattgttgtggagtatgacaaagctgctaccttgtgg
tctcttcatgaacaaataaagcaaatggaagtagcagttgaggaagctgcacaatcaagc
tctaaaaggagtaaatggcaatttatgggagcaagagatgcaggagccaaagaagagtta
cgccaagtttatggtgtctctgaacgaacagagagtgatggagctgctaatttggttcaa
aaattgagagctatcaattatgcacttgctgaactgggtcaatggtgtgctttcaaggtt
gcacaatcctttttgactgctttacaaaacgatgaaagggtaagctaccagcttgatgtg
aaatttcaggaaacctacctgagtaaagttgtctctcttttacaatgcctattatcggag
ggtgctgcttctgacaaggatatgaaagctgttgacactgaaaatgacactgaattgggt
ggaaataatcttgatgacattgaggagggcgagcttcctgatactcatgccgtctctggt
ggggagcatgtggatgtaataataggagctgctgtagctgacggaaaagtgactccaaaa
gtgcagtcattgattaaaatacttatgaagtatcaacatacagaggattttcgtgcaatc
atctttgttgaacgagttgtggctgctttggttcttccaaaggttttttctgagcttcca
tctctaagttttatcaagtgtgcaagcttgattgggcacaacaacagccaggagatgcgt
acatgccaaatgcaggacacaatttccaaattccgagatggtcgtgtaacactgttagtt
gccaccagtgttgctgaggaagggcttgatattaggcaatgcaatgtcgtcattcgcttt
gaccttgcaaaaactgttttggcatatattcagtcaagggggcgtgctagaaagcctgga
tcagattatatcctgatggttgagagggaaaatctttctcatgcggcattcttaaggaat
gctcggaacagtgaggagaccttgcggaaggaagcaatcgagagaactgacctcagtcat
cttaaagatacgtcaaggttgctttcagtggatgtgatgcccggtacagtgtaccaggtg
gaaaccactggagccgttgtgagcttaaattctgctgttggactcatccatttttactgc
tctcagttacccagtgacaggtattcaatacttcgtcctgagttcattatggagaggcat
gagaagccaggatgccccattgaatattcatgccggcttcaactcccttgtaatgcacca
tttgaaaagcttgaaggtcctatatgcagttcaatgcggcttgcacagcaggctgtgtgt
ttggctgcttgcaagaagctccatgaaatgggagcatttaccgacatgctcttgcccgac
aagggaagtggtgaagaagtggaaaaggttgaccaaaatgatgaaggagatgcacttcct
gggactgctagacatagagagttctatcctgaaggtgtagctgatatacttaagggagag
tggatcttatctggaagagattgttgtgatgattccgaacttcatctctacatgtatgcg
gttaaatgtgttgacagtggtgtttcaaaagatccattcttaactcaagtatcagatttc
gcagtactttttggcaatcagctggatgcagaggtgttatcgatgtcgatggatctattt
atcgctcgggccatgatcacaaaggcctctcttgtctttaggggtgcaatatgtattact
gaacgtcagctggcatcccttaaaaactttcatgttcgattgatgagcattgtactagac
gtggatgttgaaccttccaccacgccttgggatcctacaaaggcatatctgtttgtccct
gtggttggcgataagtctgtagatccttttaaagaaattgactgggatttggttgatgaa
ataactagagcagatgcatggaccaacccccttcagagagctcgaccagatgtttacctt
ggtacaaatgagcggacacttggtggagacagaagggagtatggatttggaaaattacgt
aacggtatggcttttggacaaaagtgccatcccacttatggtatcagaggggctgtagca
cagtttgatgttgtcaaagcttctggattgattcctaatcgaaatgcttttgaaatgcaa
aaagtggatttatcaaaaggtgaacttatgatggccgatggtcttgccaatgtgcaagat
cttgtaggaaaaattgtaactgcagctcattcagggaagaggttttacgtggattcaata
cgctatgatatgactgcagagacctcctttcctcggaaagagggctatcttggtcctttg
cagtatagctcatatgctgattactataagcaaaagtatggggttgagctgttatttaag
cgggaacctttaataagaggacgtggtgtttcatattgcaagaacctcctctctccacga
tttgaacactcagaagcacttgaatgtgaatgtgaggagacgcttgataagacatattat
gtgtttcttcctcctgagctctgctttgtacatccacttcctggatcactcgttcgaggt
gcccagaggttaccctcgataatgaggagggttgaaagtatgttgcttgcgattcagctc
aaggatataatagattatcctgtccatgcatcaaagatattggaggccttgactgctgct
tcatgccaggagacattctgttacgagagagcagagcttctgggagatgcttatttgaaa
tgggttgtcagtcgattcttgtttcttaagtatccccagaaacatgaaggtcaactcact
aggatgagacaacaaatggtgagtaacatggtcctataccagtatgcccttagcaaggga
ctgcagtcatatatccaagcagatcgatttgctccatctagatgggctgctccaggagtg
ctgccgatttttgatgaagatacaaaggaggacttatttgaccaggagaaattgcttact
gaggataaagcaggaactaatctccatgatgatgattatgaagatggtgaaaaggaagat
ggtgagcttgagagtgactcaagttcctacagagtcctttctagcaagacattagcagat
gttgtcgaagcattaattggtgtctattatgttgagggtggcaaaaatgcagctaatcac
ctcatgaaatggattggcattcaggtagagtctgatcctgaagagatagagtgtgcagta
agaccaaccacagttcctgagagcatactaaggagtgttgactttgatgctcttgaaggt
gccttaaacattaaattcaaagattggggccttttggttgaagctattactcatgcgtca
cggccatcttctggaatatcctgctaccagcgactggaatttgtgggagatgctgtctta
gaccatctcattacaaggcacttatttttcatgtatacagatctgcccccaggccgcttg
actgacctgcgagctgctgctgtgaacaatgaaaactttgcacgtgttgcagttaaacat
aagctccatttacacttacggcatgggtcgagtgcccttgaaaaacagatcagggatttt
gtgaaggaagttcaaggtgaattgtcaaagccagggttcaactcctttggtctaggagat
tgcaaagctccgaaagttcttggggacattgttgagtctattgctggtgctatttttctt
gacagtggtagagatacaaggtttacatttgctgttcgtgtgaataccgcggataaggga
tggactgatgaatgcataggagaacctatgcccagtgtgaagaaggccaaggactctgct
gcagtcctactcttagaacttcttaataaatggtattcttga
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