Carica papaya (papaya): 110814158
Help
Entry
110814158 CDS
T05151
Name
(RefSeq) protein LHY-like
KO
K12133
MYB-related transcription factor LHY
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110814158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpap03000
]
110814158
Transcription factors [BR:
cpap03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
110814158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
110814158
NCBI-ProteinID:
XP_021897216
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MPTPPQAACPNKKVMFWPVTWPIQDGQIASATSVHCKQALDLEKEPLPEKYNGDEKPSDE
NENQGDNCSQVLTLHQEAHCSSVSSVNKTSTPATVALRNSRSFREFVSPLKQDNGTSKAS
NIENSCLLQDKSIQGAEEGMNDSLPTDDMQGIQNYPRHVPVHVLERNLGTTPPPDLPYHN
SIFHATRGVHEHSSLFTNPVASSATEHQSNVPRSAHQTFPTFHPPFNPVRHSEDDYQSFF
HFSSTFSSLIVSTLLQNPAAHTAASFAASFWPYANVEASANSPTATQGGFPARQANSAPS
MAAIAAATVAAATAWWAAHGLLPLCAPLHASFTCSPPSATAVPSIDNGQAPAAKAERKEN
ILQNPSLQDQQLDAEHSEALQAQHSASKSPISSSSDSEESGGTKQNAVSEAADHEKATAV
TAEILDSNKTKSRKQVDRSSCGSNTTSSSEIERDDLEKKEKDNEELKEANLLANESSNRR
NRSSSNTSDSWKSVSEEGRLAFQALFSREVLPQSFSPPHDLKSKGHQKEEDKQEEKQTTD
EKGGDTSAFDLNSKSSDHQGVAKNALSKVENNCEESLLTIGLGHAKLKSRKTGFKPYKRC
SMEAKENRLVNATSQGDEKGPKRMRLEGEAST
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcctccacaggcagcttgtccaaacaagaaagttatgttctggcctgtcact
tggcctattcaggatggacaaattgcgtcagctacttctgtgcattgtaaacaagcactg
gacttggagaaagaaccacttcctgagaagtataatggagatgagaagccatcagatgaa
aatgaaaatcagggtgataattgttcacaggttctcacccttcaccaagaagctcattgt
tcttcagtgtcttcagtgaacaaaacttctacaccagcaacagtggcactcagaaattcg
cgctcttttagggagtttgtatctccactgaaacaggacaatgggacgagtaaggcctca
aacatagagaattcctgtctcctacaagataaatcaattcaaggtgctgaagagggtatg
aatgattcgctgccaacagatgatatgcaaggcatacaaaactacccaaggcatgtccct
gtgcatgttctagaaaggaacttgggaacaactcctcccccagatttgccatatcacaac
tctatattccatgccacaagaggagttcatgaacattccagtttgttcacaaatccggtg
gcatcttctgcaacagaacatcagagtaatgtgccaaggtctgctcatcaaacatttcca
acttttcatcctccctttaacccagttcgtcacagtgaagatgattatcaatcttttttc
cacttctcttccactttttctagtcttatcgtgtccactctgctacaaaatccagctgct
catactgcagcaagctttgcagcttccttttggccctatgcaaatgtggaagcttctgct
aattctcccacagccacccaaggaggttttccagccagacaagcgaactccgctcctagt
atggctgctattgctgctgctactgtcgcagctgcaactgcctggtgggcagcccatgga
ctccttcccttatgtgctcctcttcatgccagttttacctgttctcctccatctgctact
gcagttccatcaatagataatggccaagctccagcagcaaaggcggagaggaaagaaaac
atccttcaaaatccctctttgcaggatcaacaacttgacgcagaacactctgaagctttg
caagctcaacattcagcctctaaatcaccaatttcatcatcatcggattctgaggaaagt
ggaggcacgaagcaaaatgctgtatcagaagctgctgatcatgagaaagctacggcagta
actgctgaaattcttgattcaaacaaaacaaagagcagaaaacaagttgatcgctcttct
tgtggttcaaatacaacctctagtagtgaaatagagagagatgacttagagaagaaagag
aaagacaacgaagagctgaaagaagcaaacctgctagcaaatgagagtagcaatcgtcgc
aatagaagcagcagcaacactagtgattcttggaagtcagtctctgaagagggccggctt
gcttttcaggctctcttctccagagaggttttgccacaaagcttttcacctccacatgat
ttgaaaagtaaaggacatcaaaaagaggaggataaacaagaagaaaaacaaaccacagat
gagaaaggtggagatacatcagcatttgatctcaacagcaagtcttctgaccaccaagga
gtggcgaaaaatgcattatcaaaggttgagaataattgtgaggagagtctgctgacaatt
gggttgggacatgcaaaactcaagtcccgaaaaactggattcaaaccctacaagcggtgt
tctatggaagccaaggaaaacaggttagtgaacgccacaagccagggtgacgagaagggt
cccaagaggatgcgcttggaaggagaggcttcaacttga
DBGET
integrated database retrieval system