Carica papaya (papaya): 110814218
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Entry
110814218 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpap
Carica papaya (papaya)
Pathway
cpap04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110814218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110814218
03009 Ribosome biogenesis [BR:
cpap03009
]
110814218
04131 Membrane trafficking [BR:
cpap04131
]
110814218
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpap04147
]
110814218
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110814218
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110814218
Membrane trafficking [BR:
cpap04131
]
SNARE
SNARE associated proteins
Others
110814218
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110814218
Exosome [BR:
cpap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110814218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_17
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
NACHT
AAA_7
NB-ARC
AAA_24
TsaE
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
110814218
NCBI-ProteinID:
XP_021897305
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVSLHPDTMEKLQLFRGD
TILVKGKKRRDTVCIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEVLNSMAVTNEHFQAALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRHQI
FKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRRDN
PEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGSGGAAGSDPFAAPAGGAEEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaagctgaatcctccgattctaagggaaccaagagggattttagtactgcg
attttggagcgtaagaaggcaccgaataggctcgttgttgatgaggccgtaaacgatgac
aactcagttgtgtctcttcacccggataccatggagaagctccagctctttcgcggtgac
acgatcttggttaagggaaagaaaagaagagatactgtctgcattgcccttgcagatgac
acatgtgatgaaccaaaaattagaatgaataaggttgtgagatcgaacttaagggttagg
ctcggggatgttgtttctgttcaccaatgccctgatgttaaatatggaaagcgtgtccac
atactgccaatagacgacactgttgaaggagttactgggaatctctttgatgcatatcta
aaaccttatttcctcgaagcataccgcccagttagaaagggtgatctcttccttgtcaga
ggagggatgcgaagcgttgagttcaaagttattgagactgatcctcctgagtattgtgta
gttgctccagacacagaaatcttctgtgagggggagccagttaggagagaggatgaagat
agactggatgaggttggctacgatgatgttggtggtgttaggaaacagatggctcagata
agagaactggttgagctcccattgaggcatccacagctttttaagtcaatcggtgtgaag
ccaccaaaaggaattctgctttatggacctcccggttctgggaagactctgattgcccgt
gctgttgctaatgaaactggtgctttcttcttctgtatcaatgggcctgagatcatgtcc
aaattggctggggagagtgaaagcaacctcaggaaagcattcgaggaagcagagaagaat
gcaccgtccattatttttattgatgagattgattcaattgctcccaagagagagaagaca
catggagaagtggaaagaaggattgtctcccagctcttaacactcatggatggactgaaa
tctcgtgcgcatgttattgttattggggccacaaatcggcccaacagtattgacccagct
ctcagaaggtttggcaggtttgatagggaaatagatattggtgttcctgatgaaattgga
cgtcttgaagttcttcgaattcatacaaagaacatgaagcttgccgaagatgtggatttg
gaaagaatttctaaagatacacatggctatgttggtgctgatcttgctgctttatgtacc
gaggctgctcttcaatgcatcagggagaagatggatgtcattgacttagaagatgagtca
atagatgccgaggtgctcaattctatggcagtgacaaatgaacactttcaggctgctctt
ggaacaagcaatccttctgccctgcgtgaaactgttgtcgaggtacctaatgtcagctgg
gaagatattggaggtcttgagaatgttaaaagggagcttcaggagactgtccaataccca
gtggagcatcctgagaaattcgagaagtttggaatgtcaccctcaaagggagtcctcttc
tatggacctcctgggtgtgggaaaacacttcttgctaaggctattgccaatgaatgccag
gcaaatttcataagtgttaagggtccggaattacttactatgtggtttggagaaagtgag
gcaaatgtacgagaaatttttgataaggctcggcaatctgctccttgtgtcttattcttt
gatgagcttgactcaattgctactcagagaggaagcagtgttggagatgctggaggtgca
gcggacagggttttgaaccaacttttgacagaaatggatggcatgtctgcaaagaaaact
gtgttcattattggtgcaaccaacagaccagacattattgaccctgcacttctccgccca
ggccgtcttgatcagttgatttatattcctcttcctgacgaggaatctcgtcatcaaatt
ttcaagtcctgcttgaggaaatctccagtctccaaagatgttgacctcagagctcttgca
aaatacactcaaggcttcagtggtgcagatattactgaaatatgtcaacgtgcatgcaaa
tatgccatacgagagaacattgagaaagacattgagagggaaaggaagagaagggataac
cctgaggctatggaggaagatgttgaagacgatgtggcggagatcaaggcagcacatttt
gaagaatccatgaagtatgctaggaggagtgtgagtgatgcagacatccgcaaataccag
gcatttgcccaaacattgcagcaatcaagaggttttggaactgagttccggtttgctgag
tctggatcaggaggtgcagccggatctgatccatttgcagcaccggcaggtggagctgaa
gaagatgatctttacagttaa
DBGET
integrated database retrieval system
