Carica papaya (papaya): 110814354
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Entry
110814354 CDS
T05151
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110814354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110814354
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
RNases
110814354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
JUPITER
FAM76
Motif
Other DBs
NCBI-GeneID:
110814354
NCBI-ProteinID:
XP_021897471
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MPGVTAMEHKLDTAEKKVLVDLVKLSQKRGMKGSNGGWKEFLHSRDRKFGASLSDPAKRS
TDVLASFLKTFTEQQDLKFFAKILQCHSNRDIVEKFRKESPDKEFPEQRLVRLTFEHPQY
PLDYTFPSHSEEWVVTKLGKKSKGMTSSEMIAVDCEMVLCEDGTEAIVRVCVVNRKLEVK
LDEYVNPKKAVADYRTEITGVTAKDIEKVTCSLADIQKSINKLLSHGTILVGHSLNNDLQ
ALKIDHPRVIDTSFIFKYEGAPMYKRPSLDNLCKSVLGYELRKKGAPHDCVQDATAAMKL
VLAAVKQGVDTIIPSSEDVAALEMAKLLLHRIPKNVPCEELHRILPGDFTVEVKPSKKAQ
GGNYSALVTFPNPQEACCVFENLKGILEKDSSGLPQKLVTFKLSSGLDACLYVRKMVRDN
DIGQVLGKKRALRDKEHSDDSEGLETDRESEGKTRANTSQNDEDNNTNALKRQKVDHKSE
EKLEESINQCEDHLKEIERLKKELREKDFQLSMQDKIISDLKKKVEKLKDLKKKAR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagtcactgccatggagcataaactcgatactgccgagaaaaaggttttggtt
gatcttgtgaaattgtcccaaaaacggggaatgaaaggttcgaatggggggtggaaggag
tttttacacagtcgtgatagaaagtttggggctagcttaagtgatccagcaaagaggtcc
accgatgtgttggcatcttttctaaaaacttttactgagcagcaagacttgaagtttttc
gctaaaatattgcaatgtcactcaaaccgtgatatagtggaaaaattcagaaaggaatct
ccggacaaagagttccctgagcagaggctggtccgtttaacctttgaacacccgcagtac
ccgttagactatactttcccatcgcatagtgaggaatgggtggtaacaaagcttggtaaa
aagtccaagggtatgacatcaagtgaaatgatagctgttgattgtgagatggttctttgt
gaagatggcactgaagctatagtgagggtttgtgtggtgaatcgcaaattggaggtcaaa
cttgacgagtatgtaaaccctaaaaaagcagttgcagattatagaactgagatcactggg
gttactgccaaagatattgaaaaagttacttgttcattagctgacatacagaaatctata
aataagctactctcacatggaactattttagtaggtcacagtttaaataatgacctgcaa
gcactgaagatagaccatccaagagtaattgatacttcttttatatttaagtacgagggt
gcacctatgtataaaaggccttctctggataatttgtgcaagtctgttctgggttatgag
ctccgaaagaagggtgctccccatgactgtgtacaagatgcaactgctgcaatgaagctt
gttcttgctgcagtcaagcagggagtagataccattattccctcgagtgaagatgtggca
gcacttgagatggcaaagctccttctccatagaataccaaaaaatgtgccttgcgaagaa
ttacacagaatccttcctggggattttacagtcgaagtaaagccatctaagaaagctcaa
ggaggaaattattctgctcttgtcacctttccaaatccacaggaggcgtgttgtgtattt
gaaaatctgaaaggcatccttgagaaggattcatctggtcttccccagaaactagtgaca
tttaaactcagttctggactagatgcttgcctctacgttcgtaaaatggtccgtgataat
gatattggccaagttctagggaagaaaagagctttacgagacaaggagcactctgatgat
tctgaaggactagagacagacagagaaagtgaagggaagactagggctaacacaagccag
aatgatgaggataacaacacaaatgcattgaagagacaaaaggttgatcataaaagtgaa
gaaaaattagaggaaagcataaatcaatgcgaagatcacttgaaagagattgaaagactg
aagaaggagctgagagagaaggattttcaactctctatgcaggataagattatatctgat
ctcaaaaagaaagttgagaaactgaaggacttaaagaaaaaggcaaggtaa
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