Carica papaya (papaya): 110814887
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Entry
110814887 CDS
T05151
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110814887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110814887
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110814887
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110814887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110814887
NCBI-ProteinID:
XP_021898161
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MFLFLQIGVSSGLAEAAHVVRDTDLSPAQPLQSNQPSGNLGVIGRRVFLTFGAIGDSISG
LTINSGGMHDQLYNLQMLEAAHYKLPQPKDSERPRNYVPRHPAVTPPSYPQVQAPIVNNP
VLWERFGSDAYGTDTLFFAFYYQQNTYQQYFAAKELKKQSWRYHRKYNTWFQRHEEPKVA
TDEYEQGTYVYFDFHIANEDGQHGWCQRIKTEFTFEYNYLEDDLIV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttttctgcagattggagtatccagtggtttggcagaggctgctcatgtggtt
agagataccgatctctcacctgcccaaccattacagtcgaatcagccttctggcaatctt
ggagttattggtcgtagagtgtttctgacctttggcgcaattggtgatagtatcagtgga
ttgactattaattctgggggaatgcatgatcagctgtacaatttgcagatgcttgaagct
gcacattataaacttcctcagcccaaagactctgagcgtcccagaaattatgtgccaagg
caccctgctgtaacacctcctagctatcctcaagttcaggcacctattgttaataatcct
gtactttgggaaagatttggtagcgacgcttatggcactgatacactgttctttgcattt
tactatcaacagaatacttatcaacaatatttcgctgcaaaagagctgaagaagcaatct
tggagataccatagaaagtataacacatggtttcagcggcacgaagagccaaaggtagct
actgatgaatatgaacaggggacttatgtgtactttgatttccatattgctaatgaagat
ggccaacacggatggtgtcaaaggatcaagactgagttcacctttgagtacaattatctt
gaagatgatctcattgtatag
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integrated database retrieval system
