Carica papaya (papaya): 110815282
Help
Entry
110815282 CDS
T05151
Name
(RefSeq) THO complex subunit 5B-like isoform X1
KO
K13174
THO complex subunit 5
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110815282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110815282
03041 Spliceosome [BR:
cpap03041
]
110815282
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110815282
Spliceosome [BR:
cpap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110815282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
PCNP
Motif
Other DBs
NCBI-GeneID:
110815282
NCBI-ProteinID:
XP_021898689
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MEDDEIEEGMVIEDDEQVAPPPPKIEKSAYDMLRDSKASVEKIVAKMLAMKKEGKPKSEL
KEILTQMFLNFVNLRQANRSILLQEDRVKAETERAKAPVDLTTLQLHNLMYEKSHYVKAI
KACKDFKSKYPDIELVPEEEFLRDAPEDIKGQKLSSDISHDLMLKRLNYELYQRKELCKL
RARLEQHKKSLLETIASRKKFLSTLPSHLKSLKKASLPVQNQLGLLHTKKLKQHHSTELL
PPPLYVLYSQLLAQKEAFGENIELEIVGSLKDAQASARQQANKDPGLSSSVESSRLEDDA
PDEEDDGQRRRKRPKRISSKEGIDQSRVYQVHPLKVLLHIFDDEAYDPKSVKLITLRFEY
MSKLNVVCVAIEGSENDILCNLFPDDMGVELPHQSAKLLVGDGPAFDENRVSRPYKWAQH
LAGIDFLPELPPLFTGQEPSTESAKSDTVVSGLQLYRQQNRVQTVVQRIRSRKRLSWLLW
NSLIYLQS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgagatagaggaagggatggtgatagaagatgatgagcaggtagcgcct
ccaccgccaaagatagagaaatcggcatatgatatgcttcgagatagcaaagcttcagtc
gaaaagattgtggccaaaatgcttgctatgaagaaagagggcaaacccaaatccgagctc
aaagaaatccttacgcaaatgttccttaatttcgttaatctacgtcaggcgaatcggtcg
attttgctacaggaggaccgtgttaaggcagaaacagagcgtgcaaaagcgcctgttgat
ctcacgactctgcagcttcataatttaatgtatgagaagagtcactatgttaaagctata
aaggcttgcaaagatttcaaatcgaagtatcctgatatcgaacttgtgcctgaagaagaa
tttttgcgggatgcacctgaagatattaaagggcaaaagctgtccagtgacatttcgcat
gatctgatgctaaagaggcttaattatgagctctaccagcgcaaagaactgtgtaaactt
cgtgcaagattggaacaacacaagaaaagtctgctggaaactattgcaagccggaaaaag
ttcctgtcaactcttccttcacacctcaagtctcttaagaaagcatccttgccagtacag
aaccagttgggcctcctgcacactaagaaactaaagcagcaccattccactgagttgctt
ccacctccactctacgttctctactcacagttgttggcacaaaaagaagcatttggagaa
aatattgagctggaaattgtggggagtttgaaggatgctcaagcttcagcccgccagcaa
gcaaataaggatcctggcctatcttccagtgtagagagctccagattggaggatgatgca
cctgatgaagaagatgatggccagagaaggagaaaacgtccaaaaaggatttcaagcaag
gagggtatcgatcagtcaagagtatatcaagttcacccacttaaggtcctccttcacata
tttgatgatgaggcgtatgatcccaagtctgtaaaactcatcactttgaggttcgaatac
atgtcaaagttgaatgttgtatgtgttgcaattgaaggatctgaaaacgatatattatgc
aacttgtttcctgatgacatgggtgttgagcttcctcatcagtcagcaaagctccttgtt
ggtgatggtccagcatttgatgaaaacagagtttcccgaccttataagtgggctcagcat
ttggcaggaatcgattttttacccgagctcccaccattgtttactggccaagaacctagc
actgagagtgccaaaagtgacactgttgtatctggtctgcaattgtatcgccagcagaac
cgggtacagacagttgtgcaaagaattcgctctcgaaaaaggctcagctggctcttgtgg
aacagcttgatttacttacaaagctaa
DBGET
integrated database retrieval system
