Carica papaya (papaya): 110815338
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Entry
110815338 CDS
T05151
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
cpap
Carica papaya (papaya)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
AAA_30
CMS1
YgbB
ERCC3_RAD25_C
AAA_19
Cas3-like_C_2
zf-CCHC_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
110815338
NCBI-ProteinID:
XP_021898791
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MASLLGMPSLSLKLYSISCRGSHRRTGNTTSLPLADKSHFNALVAAGRPLLLKSGTSSFR
HTLSFVPSAVATPNSILSEEAFKGLGGLDLASDSDASSDELVISKLGLPQTLVDSLEKRG
ITHLFPIQRAVLLPALEGRDIIARAKTGTGKTLAFGIPIIKRLTEDAEQRGSQRRSGRLP
KVLVLAPTRELAKQVEKEIKESAPFLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID
LIEGNSLKLGEVEFLVLDEADQMLAVGFEEDVEVILENLPVKRQSLLFSATMPAWVKKLA
RKYLDKPLNIDLVGDQEEKLAEGIKLYAISTTSTSKRTILSDLITVYAKGGKTIVFTQTK
RDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL
IIHYELPNDAETFVHRSGRTGRAGKEGTAILMYTSSQRRTVRSLERDVGCKFDFISPPAM
EEVLESSAEQVVATLNGVHPESIEFFTPTAQKLFEEQGTSALAAALAHLSGFSRPPSSRS
LINHEQGWVTLQLTRDPAYSRGFLSARSVTGFLSDIYPAAADEVGKIYLIADDRVQGAVF
DLPEEIAKELLNKETPTGNSISKLTKLPPLQDDGPPSDYYGRFSSRDRFSRGASKSRRGS
RASRGWGSGRDSDEEGRVGRSSWSRNSRSNDDDWLIGGRRSNRMSSSRDRGFGGSCFNCG
RSGHRASECPEKRGY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttaggaatgccatctctttctctgaaactttatagtatcagctgcaga
ggcagccacagaagaaccgggaataccacatccttacccttggccgacaagtctcacttc
aatgccctcgtagctgcaggcagacccttgctcctaaagagcggcaccagcagcttcagg
cataccctctcttttgttccatcagctgtagctactcctaattccattctcagtgaggag
gccttcaagggcctcggtggcctcgaccttgcctctgactccgacgcctcttctgatgag
cttgtcatatctaagttgggtttgccccagactctcgtcgactcccttgagaagcgtggc
atcactcacctcttcccaattcaaagagctgtgctgctcccggcacttgaaggtcgagat
atcattgctcgtgcaaagactggaactgggaagacgttggcctttggtattcccataata
aaacgccttactgaagatgctgaacaacgaggttctcagaggaggtctggtcgtcttcct
aaagttttagtgctagcacccacccgggagttagcgaagcaagtagaaaaagaaattaaa
gagtccgcaccttttctgaacactgtttgtgtttatggaggggtttcttataacacgcag
caaaatgctctctctcgtggggttgatgttgtggttggaacaccgggacgcatcattgac
ttgatagaaggtaatagtctcaaactgggggaagtagaatttttggtgcttgatgaggct
gatcagatgcttgccgttggattcgaggaggatgtggaagtcattttagaaaatcttccg
gtgaagcgacagagtttgcttttttctgcaactatgcctgcttgggtcaagaaattggcc
agaaagtacttggacaaacctctcaatatcgatttggtgggagaccaagaggagaagctt
gcggaagggatcaaactttacgctatatcaaccacttcaacttcaaagcgaacgatacta
agtgatcttataacagtctatgcaaagggtgggaagaccattgtttttacacagacaaag
cgagatgcagatgaagtctcaatggctcttacaaatagcatagcttctgaggcattgcac
ggagatatatcccagcaccagagggagagaactttgaacggttttcgacaaggaaaattc
acagtacttgttgcaactgatgttgcttctcgagggcttgatatacccaatgttgatctt
atcatccactatgaactccccaatgatgcagagacctttgtgcaccgctctggccgtact
ggacgagcagggaaggaagggactgcaattctcatgtatactagcagccagaggagaact
gtgagatcccttgagcgtgatgtggggtgcaagtttgatttcattagtccaccagctatg
gaggaggtactggaatcatcagctgagcaagtggttgctactcttaatggcgttcatcct
gaatctattgagtttttcaccccaactgcccaaaaattgtttgaggaacaaggaacaagt
gctctagctgcagctctagctcacttaagtggattctctcgacctccttcatccagatct
cttatcaaccatgagcagggatgggtaacactacaattgacgcgggatcctgcatatagt
agaggctttctctctgctagatctgtcactgggtttctttctgacatttaccctgctgcc
gcagatgaagttgggaaaatatatttaatcgcagatgacagggttcaaggagctgttttt
gatcttccggaggagattgccaaagagctgctaaacaaggaaacaccaacaggaaacagt
atttccaagttaactaagttgcctcctttgcaagatgatggaccaccaagcgattactat
ggcagattttcaagcagagatcggttttcccgaggagcttctaagagccgcagaggaagt
agagcctcccggggttggggcagtggccgagattctgatgaggaggggcgtgttggtcgg
agtagctggtctcgaaactcaaggagcaatgatgatgattggttaattggtggtagaaga
tcaaacaggatgtcatcttcaagggacaggggttttggaggttcctgcttcaactgtggg
cgatccgggcacagggcctctgaatgcccagaaaaaagaggttactag
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